Detailed information NTG0610656

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MOO21_RS21420
• Genome accession: NZ_CP101513
• Coordinates: 4432895..4433920 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain HH194M
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4427895..4438920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MOO21_RS21400 (MOO21_21395)	metJ	4428956..4429273 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MOO21_RS21405 (MOO21_21400)	yiiX	4429457..4430065 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
MOO21_RS21410 (MOO21_21405)	rpmE	4430126..4430338 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MOO21_RS21415 (MOO21_21410)	priA	4430541..4432739 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
MOO21_RS21420 (MOO21_21415)	cytR	4432895..4433920 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MOO21_RS21425 (MOO21_21420)	ftsN	4434012..4434971 (+)	960	WP_000068828.1	cell division protein FtsN	-
MOO21_RS21430 (MOO21_21425)	hslV	4435064..4435594 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MOO21_RS21435 (MOO21_21430)	hslU	4435604..4436935 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MOO21_RS21440 (MOO21_21435)	menA	4437002..4437928 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MOO21_RS21445 (MOO21_21440)	rraA	4438021..4438506 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MOO21_RS21450 (MOO21_21445)	zapB	4438591..4438836 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=610656 MOO21_RS21420 WP_000644904.1 4432895..4433920(+) (cytR) [Escherichia coli strain HH194M]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=610656 MOO21_RS21420 WP_000644904.1 4432895..4433920(+) (cytR) [Escherichia coli strain HH194M]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628