Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   M493_RS06680 Genome accession   NC_022080
Coordinates   1319152..1320099 (+) Length   315 a.a.
NCBI ID   WP_020959536.1    Uniprot ID   S6A1D4
Organism   Geobacillus genomosp. 3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1314152..1325099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M493_RS06665 (M493_07190) cysI 1315835..1317556 (+) 1722 WP_020959533.1 assimilatory sulfite reductase (NADPH) hemoprotein subunit -
  M493_RS06670 (M493_07195) - 1317631..1318068 (+) 438 Protein_1268 aldehyde dehydrogenase family protein -
  M493_RS06675 (M493_07200) - 1318199..1318777 (+) 579 WP_020959535.1 Uma2 family endonuclease -
  M493_RS06680 (M493_07205) ceuB 1319152..1320099 (+) 948 WP_020959536.1 ABC transporter permease Machinery gene
  M493_RS06685 (M493_07210) - 1320092..1321042 (+) 951 WP_020959537.1 iron chelate uptake ABC transporter family permease subunit -
  M493_RS06690 (M493_07215) - 1321036..1321791 (+) 756 WP_020959538.1 ABC transporter ATP-binding protein -
  M493_RS06695 (M493_07220) - 1321906..1322877 (+) 972 WP_020959539.1 siderophore ABC transporter substrate-binding protein -
  M493_RS06700 (M493_07225) - 1322920..1323564 (-) 645 WP_020959540.1 hypothetical protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34596.64 Da        Isoelectric Point: 9.2924

>NTDB_id=61049 M493_RS06680 WP_020959536.1 1319152..1320099(+) (ceuB) [Geobacillus genomosp. 3]
MKKWILLLVVLSLASLFVGVHHLSPLALLEGDNEAWEIFWISRLPRLVSILIAGSSVSICGLIMQQLSQNKFVSPTTAGT
MDWARLGLLVAMIVFASAGPLVKAALAVVFAFIGTLLFMTILDRVKYKDSVFIPLIGLMVGNIIGSVTTFLAYKYDLIQS
VSAWLHGDFSVMMQGRYEMLYVSVPLMALAYLYANRFTIAGMGEEMATNLGLRYRSIVYIGLLIVAVVSAVEVLTVGTLP
FLGLIVPNIVTIYYGDHLRKVLPLTAVFGALFVLLCDVFGRVVIYPYEIPIGLTVGVIGSGVFLYLLVRRTKQYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=61049 M493_RS06680 WP_020959536.1 1319152..1320099(+) (ceuB) [Geobacillus genomosp. 3]
ATGAAAAAATGGATCTTGTTGCTTGTCGTATTGTCGCTGGCATCGTTGTTTGTCGGCGTGCATCATTTATCGCCGCTGGC
GTTGCTTGAAGGCGACAACGAGGCATGGGAAATTTTTTGGATCAGCCGTTTGCCCCGGCTTGTGAGCATTCTCATCGCGG
GATCAAGCGTCAGCATCTGCGGCTTGATTATGCAACAACTAAGTCAAAACAAATTTGTGTCGCCGACAACCGCGGGAACG
ATGGATTGGGCGCGGCTTGGCCTGTTAGTGGCGATGATTGTATTCGCTTCTGCCGGCCCGCTTGTGAAGGCAGCGTTGGC
TGTTGTTTTTGCGTTCATCGGCACGTTGCTGTTTATGACTATTTTGGATCGTGTGAAGTATAAAGATTCCGTGTTTATCC
CGTTGATCGGGCTGATGGTTGGCAACATTATCGGCTCGGTGACCACGTTTTTGGCGTACAAATATGATTTGATTCAATCC
GTGTCCGCGTGGCTGCATGGCGATTTTTCCGTTATGATGCAAGGACGTTATGAAATGTTGTATGTGAGCGTCCCGCTCAT
GGCGCTCGCGTATTTGTACGCCAACCGATTCACGATCGCTGGCATGGGAGAGGAGATGGCGACAAACCTAGGGCTTCGCT
ATCGTTCTATCGTGTATATCGGGCTTCTCATTGTCGCGGTCGTTTCAGCGGTGGAAGTGTTAACCGTTGGAACGTTGCCG
TTTTTAGGGCTGATCGTTCCGAATATTGTCACGATTTATTACGGAGATCATTTGCGCAAAGTATTGCCATTGACGGCCGT
GTTTGGCGCATTGTTTGTCTTGCTTTGCGACGTGTTCGGCCGTGTGGTCATTTATCCGTATGAAATTCCTATCGGTTTGA
CGGTTGGGGTGATCGGAAGCGGTGTTTTTCTATATTTGCTTGTAAGGAGAACGAAGCAGTATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S6A1D4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.682

99.683

0.495

Multiple sequence alignment