Detailed information NTG0610311

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMK57_RS25775
• Genome accession: NZ_CP101305
• Coordinates: 5144329..5145354 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2002-3211
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5139329..5150354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMK57_RS25755 (NMK57_25755)	metJ	5140390..5140707 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMK57_RS25760 (NMK57_25760)	yiiX	5140891..5141499 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
NMK57_RS25765 (NMK57_25765)	rpmE	5141560..5141772 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMK57_RS25770 (NMK57_25770)	priA	5141975..5144173 (+)	2199	WP_001370237.1	primosomal protein N'	Machinery gene
NMK57_RS25775 (NMK57_25775)	cytR	5144329..5145354 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMK57_RS25780 (NMK57_25780)	ftsN	5145446..5146405 (+)	960	WP_000068831.1	cell division protein FtsN	-
NMK57_RS25785 (NMK57_25785)	hslV	5146498..5147028 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMK57_RS25790 (NMK57_25790)	hslU	5147038..5148369 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMK57_RS25795 (NMK57_25795)	menA	5148436..5149362 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMK57_RS25800 (NMK57_25800)	rraA	5149455..5149940 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMK57_RS25805 (NMK57_25805)	zapB	5150025..5150270 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=610311 NMK57_RS25775 WP_000644904.1 5144329..5145354(+) (cytR) [Escherichia coli strain 2002-3211]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=610311 NMK57_RS25775 WP_000644904.1 5144329..5145354(+) (cytR) [Escherichia coli strain 2002-3211]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GAATTATGGTTGATCCACAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCACCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628