Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   RBAU_RS21740 Genome accession   NC_022075
Coordinates   387347..387511 (+) Length   54 a.a.
NCBI ID   WP_272949499.1    Uniprot ID   -
Organism   Bacillus velezensis UCMB5033     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 382347..392511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBAU_RS21735 srfAB 384292..387282 (+) 2991 Protein_322 surfactin non-ribosomal peptide synthetase SrfAB -
  RBAU_RS21740 comS 387347..387511 (+) 165 WP_272949499.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6180.18 Da        Isoelectric Point: 12.0559

>NTDB_id=61024 RBAU_RS21740 WP_272949499.1 387347..387511(+) (comS) [Bacillus velezensis UCMB5033]
MRARRSSSLNRSDKRLIRSIILFPQHNAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=61024 RBAU_RS21740 WP_272949499.1 387347..387511(+) (comS) [Bacillus velezensis UCMB5033]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAA
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

59.091

81.481

0.481

Multiple sequence alignment