Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RES6_RS01420 Genome accession   NZ_CP084229
Coordinates   305690..306367 (+) Length   225 a.a.
NCBI ID   WP_161517168.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SE3.8     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 300690..311367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RES6_RS01395 (RES6_001395) - 301040..302254 (+) 1215 WP_054105923.1 O-antigen ligase -
  RES6_RS01400 (RES6_001400) - 302241..303176 (+) 936 WP_161511638.1 LCP family protein -
  RES6_RS01405 (RES6_001405) - 303266..304741 (-) 1476 WP_053032541.1 alkaline phosphatase -
  RES6_RS01410 (RES6_001410) - 305140..305310 (+) 171 WP_176744128.1 hypothetical protein -
  RES6_RS01415 (RES6_001415) - 305496..305660 (+) 165 WP_162838897.1 hypothetical protein -
  RES6_RS01420 (RES6_001420) braR 305690..306367 (+) 678 WP_161517168.1 response regulator transcription factor Regulator
  RES6_RS01425 (RES6_001425) braS 306370..307266 (+) 897 WP_161517166.1 sensor histidine kinase Regulator
  RES6_RS01430 (RES6_001430) - 307441..308190 (+) 750 WP_161511685.1 ABC transporter ATP-binding protein -
  RES6_RS01435 (RES6_001435) - 308192..310183 (+) 1992 WP_161517164.1 ABC transporter permease -
  RES6_RS01440 (RES6_001440) - 310273..311268 (+) 996 WP_161517162.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 26037.90 Da        Isoelectric Point: 4.6536

>NTDB_id=610184 RES6_RS01420 WP_161517168.1 305690..306367(+) (braR) [Staphylococcus haemolyticus strain SE3.8]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKNCKLVVDEATLYHEDESVQSVQLSFTELQ
ILNMLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVIDLIETKKNVGYKVS

Nucleotide


Download         Length: 678 bp        

>NTDB_id=610184 RES6_RS01420 WP_161517168.1 305690..306367(+) (braR) [Staphylococcus haemolyticus strain SE3.8]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATTGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATCGGTTCAATTGTCCTTCACTGAATTACAA
ATCTTAAATATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAAAAGTGTTGGGAGTCGGAGAA
TTTTATAGATGACAATACTTTAGCAGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTATAGATTTAA
TTGAAACTAAGAAGAATGTTGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.786

99.556

0.764