Detailed information    

insolico Bioinformatically predicted

Overview


Name   proC   Type   Machinery gene
Locus tag   H8R35_RS07455 Genome accession   NZ_CP084085
Coordinates   1441003..1441734 (-) Length   243 a.a.
NCBI ID   WP_002859150.1    Uniprot ID   A0AB36G763
Organism   Campylobacter jejuni strain MS2167     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1436003..1446734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8R35_RS07415 (H8R35_001249) - 1436117..1436878 (+) 762 WP_255020474.1 ATP-binding protein -
  H8R35_RS07420 (H8R35_001250) - 1436875..1437561 (+) 687 WP_002852847.1 endonuclease III domain-containing protein -
  H8R35_RS07425 (H8R35_001251) thiD 1437558..1438370 (+) 813 WP_002869542.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  H8R35_RS07430 (H8R35_001252) thiE 1438360..1438992 (+) 633 WP_002852670.1 thiamine phosphate synthase -
  H8R35_RS07435 (H8R35_001253) hemD 1438970..1439599 (+) 630 WP_002869541.1 uroporphyrinogen-III synthase -
  H8R35_RS07440 (H8R35_001254) - 1439596..1440048 (-) 453 WP_002859148.1 hypothetical protein -
  H8R35_RS07445 (H8R35_001255) - 1440045..1440707 (-) 663 WP_002858296.1 hypothetical protein -
  H8R35_RS07450 (H8R35_001256) ctsT 1440704..1441006 (-) 303 WP_002875928.1 hypothetical protein Machinery gene
  H8R35_RS07455 (H8R35_001257) proC 1441003..1441734 (-) 732 WP_002859150.1 pyrroline-5-carboxylate reductase Machinery gene
  H8R35_RS07460 (H8R35_001258) fliW 1441734..1442123 (-) 390 WP_002852982.1 flagellar assembly protein FliW -
  H8R35_RS07465 (H8R35_001259) - 1442284..1442931 (+) 648 WP_002860191.1 outer membrane protein assembly factor BamD -
  H8R35_RS07470 (H8R35_001260) lon 1442948..1445323 (+) 2376 WP_002852988.1 endopeptidase La -
  H8R35_RS07475 (H8R35_001261) rpsR 1445383..1445643 (-) 261 WP_002853032.1 30S ribosomal protein S18 -
  H8R35_RS07480 (H8R35_001262) ssb 1445654..1446202 (-) 549 WP_002869474.1 single-stranded DNA-binding protein -
  H8R35_RS07485 (H8R35_001263) rpsF 1446211..1446588 (-) 378 WP_002853062.1 30S ribosomal protein S6 -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26559.95 Da        Isoelectric Point: 8.5934

>NTDB_id=609489 H8R35_RS07455 WP_002859150.1 1441003..1441734(-) (proC) [Campylobacter jejuni strain MS2167]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide


Download         Length: 732 bp        

>NTDB_id=609489 H8R35_RS07455 WP_002859150.1 1441003..1441734(-) (proC) [Campylobacter jejuni strain MS2167]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAGCATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GAGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

99.588

100

0.996