Detailed information NTG0609486

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H8R35_RS07085
• Genome accession: NZ_CP084085
• Coordinates: 1368862..1369821 (-)
• Length: 319 a.a.
• NCBI ID: WP_255020464.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain MS2167
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1363862..1374821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8R35_RS07055 (H8R35_001184)	ccoS	1364819..1365025 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
H8R35_RS07060 (H8R35_001185)	-	1365048..1365350 (-)	303	WP_002852762.1	cytochrome c	-
H8R35_RS07065 (H8R35_001186)	gmhB	1365431..1365992 (+)	562	Protein_1368	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H8R35_RS07070 (H8R35_001187)	rfaD	1365993..1366946 (+)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
H8R35_RS07075 (H8R35_001188)	rfaE1	1366939..1368324 (+)	1386	WP_002910336.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H8R35_RS07080 (H8R35_001189)	gmhA	1368321..1368881 (+)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
H8R35_RS07085 (H8R35_001190)	waaF	1368862..1369821 (-)	960	WP_255020464.1	lipopolysaccharide heptosyltransferase II	Regulator
H8R35_RS07090 (H8R35_001191)	-	1369880..1370698 (+)	819	WP_255020465.1	glycosyltransferase family 2 protein	-
H8R35_RS07095 (H8R35_001192)	wlaTC	1370701..1371660 (-)	960	WP_002876191.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
H8R35_RS07100 (H8R35_001193)	wlaTB	1371657..1372613 (-)	957	WP_002860237.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
H8R35_RS07105 (H8R35_001194)	-	1372606..1373379 (-)	774	WP_002866160.1	glycosyltransferase family 25 protein	-
H8R35_RS07110 (H8R35_001195)	-	1373450..1374436 (+)	987	WP_255020466.1	hypothetical protein	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36619.14 Da
• Isoelectric Point: 10.2870

>NTDB_id=609486 H8R35_RS07085 WP_255020464.1 1368862..1369821(-) (waaF) [Campylobacter jejuni strain MS2167]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=609486 H8R35_RS07085 WP_255020464.1 1368862..1369821(-) (waaF) [Campylobacter jejuni strain MS2167]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTAGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.025	99.687	0.937