Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   H8R35_RS05795 Genome accession   NZ_CP084085
Coordinates   1102876..1104060 (+) Length   394 a.a.
NCBI ID   WP_002868491.1    Uniprot ID   A0A0Q3JWH1
Organism   Campylobacter jejuni strain MS2167     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1097876..1109060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8R35_RS05775 - 1098946..1099548 (+) 603 WP_002934904.1 gamma-glutamyl-CDP-amidate hydrolase -
  H8R35_RS05780 (H8R35_000966) - 1099550..1100311 (+) 762 WP_052797116.1 CTP:phosphoglutamine cytidylyltransferase -
  H8R35_RS05785 cysC 1100301..1100813 (+) 513 WP_002934900.1 cytidine diphosphoramidate kinase -
  H8R35_RS05790 kpsC 1100810..1102879 (+) 2070 WP_255020446.1 capsular polysaccharide biosynthesis protein -
  H8R35_RS05795 (H8R35_000967) kpsS 1102876..1104060 (+) 1185 WP_002868491.1 capsule polysaccharide modification protein KpsS Regulator
  H8R35_RS05800 (H8R35_000968) - 1104133..1105254 (+) 1122 WP_002860382.1 hypothetical protein -
  H8R35_RS05805 (H8R35_000969) - 1105251..1106612 (+) 1362 WP_002934898.1 cytochrome P450 -
  H8R35_RS05810 (H8R35_000970) - 1106609..1107028 (+) 420 WP_255020447.1 hypothetical protein -
  H8R35_RS05815 (H8R35_000971) acpS 1107029..1107376 (-) 348 WP_002780441.1 holo-ACP synthase -
  H8R35_RS05820 (H8R35_000972) fliL 1107376..1107912 (-) 537 WP_002780442.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46855.56 Da        Isoelectric Point: 9.9031

>NTDB_id=609479 H8R35_RS05795 WP_002868491.1 1102876..1104060(+) (kpsS) [Campylobacter jejuni strain MS2167]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=609479 H8R35_RS05795 WP_002868491.1 1102876..1104060(+) (kpsS) [Campylobacter jejuni strain MS2167]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGTATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Q3JWH1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.731

100

0.987