Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H8R33_RS06465 Genome accession   NZ_CP084080
Coordinates   1223672..1224640 (-) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni strain MS2005     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1218672..1229640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8R33_RS06440 (H8R33_001070) - 1220204..1220758 (+) 555 WP_002867306.1 membrane protein -
  H8R33_RS06450 (H8R33_001071) ceuB 1220984..1221976 (-) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  H8R33_RS06455 (H8R33_001072) ceuD 1221989..1222744 (-) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  H8R33_RS06460 (H8R33_001073) ceuC 1222741..1223679 (-) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  H8R33_RS06465 ceuB 1223672..1224640 (-) 969 WP_002874446.1 ABC transporter permease Machinery gene
  H8R33_RS06470 (H8R33_001074) pldA 1224726..1225715 (-) 990 WP_002864239.1 phospholipase A -
  H8R33_RS06475 mobA 1225712..1226287 (-) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  H8R33_RS06480 (H8R33_001075) - 1226349..1227656 (+) 1308 WP_002864240.1 NFACT family protein -
  H8R33_RS06485 (H8R33_001076) - 1227658..1227996 (+) 339 WP_002852397.1 hypothetical protein -
  H8R33_RS06490 (H8R33_001077) cdsA 1228005..1228730 (+) 726 WP_002869557.1 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=609403 H8R33_RS06465 WP_002874446.1 1223672..1224640(-) (ceuB) [Campylobacter jejuni strain MS2005]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=609403 H8R33_RS06465 WP_002874446.1 1223672..1224640(-) (ceuB) [Campylobacter jejuni strain MS2005]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTGCTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGCATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994