Detailed information NTG0609367

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NML24_RS20815
• Genome accession: NZ_CP101233
• Coordinates: 4284654..4285679 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC21Z-137
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4279654..4290679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NML24_RS20795 (NML24_20770)	metJ	4280715..4281032 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NML24_RS20800 (NML24_20775)	yiiX	4281216..4281824 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NML24_RS20805 (NML24_20780)	rpmE	4281885..4282097 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NML24_RS20810 (NML24_20785)	priA	4282300..4284498 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
NML24_RS20815 (NML24_20790)	cytR	4284654..4285679 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NML24_RS20820 (NML24_20795)	ftsN	4285771..4286730 (+)	960	WP_000068828.1	cell division protein FtsN	-
NML24_RS20825 (NML24_20800)	hslV	4286823..4287353 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NML24_RS20830 (NML24_20805)	hslU	4287363..4288694 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NML24_RS20835 (NML24_20810)	menA	4288761..4289687 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NML24_RS20840 (NML24_20815)	rraA	4289780..4290265 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NML24_RS20845 (NML24_20820)	zapB	4290350..4290595 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=609367 NML24_RS20815 WP_000644904.1 4284654..4285679(+) (cytR) [Escherichia coli strain EC21Z-137]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=609367 NML24_RS20815 WP_000644904.1 4284654..4285679(+) (cytR) [Escherichia coli strain EC21Z-137]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628