Detailed information NTG0609207

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NML26_RS23370
• Genome accession: NZ_CP101210
• Coordinates: 4796755..4797780 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC21Z-147
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4791755..4802780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NML26_RS23350 (NML26_23360)	metJ	4792940..4793257 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NML26_RS23355 (NML26_23365)	yiiX	4793317..4793925 (+)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
NML26_RS23360 (NML26_23370)	rpmE	4793986..4794198 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NML26_RS23365 (NML26_23375)	priA	4794401..4796599 (+)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
NML26_RS23370 (NML26_23380)	cytR	4796755..4797780 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NML26_RS23375 (NML26_23385)	ftsN	4797872..4798831 (+)	960	WP_000068818.1	cell division protein FtsN	-
NML26_RS23380 (NML26_23390)	hslV	4798924..4799454 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NML26_RS23385 (NML26_23395)	hslU	4799464..4800795 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NML26_RS23390 (NML26_23400)	menA	4800862..4801788 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NML26_RS23395 (NML26_23405)	rraA	4801881..4802366 (+)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
NML26_RS23400 (NML26_23410)	zapB	4802451..4802696 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=609207 NML26_RS23370 WP_000644904.1 4796755..4797780(+) (cytR) [Escherichia coli strain EC21Z-147]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=609207 NML26_RS23370 WP_000644904.1 4796755..4797780(+) (cytR) [Escherichia coli strain EC21Z-147]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628