Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LCF45_RS06020 Genome accession   NZ_CP084035
Coordinates   1184640..1184816 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus sp. 41-22     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179640..1189816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LCF45_RS06000 (LCF45_05990) clpB 1179966..1182566 (+) 2601 WP_003187936.1 ATP-dependent chaperone ClpB -
  LCF45_RS06005 (LCF45_05995) - 1182600..1182782 (-) 183 WP_001211111.1 YjzD family protein -
  LCF45_RS06010 (LCF45_06000) - 1182939..1183673 (+) 735 WP_002030268.1 hydrolase -
  LCF45_RS06015 (LCF45_06005) - 1183703..1184575 (+) 873 WP_263894706.1 NAD-dependent epimerase/dehydratase family protein -
  LCF45_RS06020 (LCF45_06010) comZ 1184640..1184816 (+) 177 WP_002011319.1 ComZ family protein Regulator
  LCF45_RS06025 (LCF45_06015) fabH 1185251..1186183 (+) 933 WP_001100550.1 beta-ketoacyl-ACP synthase III -
  LCF45_RS06030 (LCF45_06020) fabF 1186215..1187453 (+) 1239 WP_002030364.1 beta-ketoacyl-ACP synthase II -
  LCF45_RS06035 (LCF45_06025) - 1187569..1188360 (+) 792 WP_002030365.1 DUF2268 domain-containing protein -
  LCF45_RS06040 (LCF45_06030) - 1188502..1189248 (+) 747 WP_002030367.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=609162 LCF45_RS06020 WP_002011319.1 1184640..1184816(+) (comZ) [Bacillus sp. 41-22]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=609162 LCF45_RS06020 WP_002011319.1 1184640..1184816(+) (comZ) [Bacillus sp. 41-22]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586