Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LCR03_RS00165 Genome accession   NZ_CP084008
Coordinates   40736..41632 (-) Length   298 a.a.
NCBI ID   WP_002456718.1    Uniprot ID   A0A2T4LGX3
Organism   Staphylococcus epidermidis strain NBRC 113846     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 35736..46632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LCR03_RS00150 (LCR03_00150) - 37168..37758 (-) 591 WP_001830621.1 DUF4064 domain-containing protein -
  LCR03_RS00155 (LCR03_00155) - 37862..39874 (-) 2013 WP_002456335.1 ABC transporter permease -
  LCR03_RS00160 (LCR03_00160) - 39876..40625 (-) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  LCR03_RS00165 (LCR03_00165) braS 40736..41632 (-) 897 WP_002456718.1 HAMP domain-containing sensor histidine kinase Regulator
  LCR03_RS00170 (LCR03_00170) braR 41638..42303 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  LCR03_RS00175 (LCR03_00175) - 42334..42513 (-) 180 WP_001830653.1 hypothetical protein -
  LCR03_RS00180 (LCR03_00180) - 42811..44280 (+) 1470 WP_002437984.1 alkaline phosphatase -
  LCR03_RS00185 (LCR03_00185) - 44403..45947 (-) 1545 WP_001830616.1 NAD(P)H-binding protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34883.51 Da        Isoelectric Point: 6.8361

>NTDB_id=608915 LCR03_RS00165 WP_002456718.1 40736..41632(-) (braS) [Staphylococcus epidermidis strain NBRC 113846]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=608915 LCR03_RS00165 WP_002456718.1 40736..41632(-) (braS) [Staphylococcus epidermidis strain NBRC 113846]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAATGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTCGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTCTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4LGX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597