Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JF568_RS01645 Genome accession   NZ_CP083931
Coordinates   324108..324572 (-) Length   154 a.a.
NCBI ID   WP_097114858.1    Uniprot ID   A0A286EG80
Organism   Alysiella filiformis DSM 16848     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 319108..329572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JF568_RS01635 (JF568_01635) - 320988..322697 (-) 1710 WP_097114893.1 FMN-binding glutamate synthase family protein -
  JF568_RS01640 (JF568_01640) pseC 322768..323922 (-) 1155 WP_097114859.1 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase -
  JF568_RS01645 (JF568_01645) recX 324108..324572 (-) 465 WP_097114858.1 recombination regulator RecX Regulator
  JF568_RS01650 (JF568_01650) - 324562..325266 (-) 705 WP_097114857.1 phosphoglycolate phosphatase -
  JF568_RS01655 (JF568_01655) - 325850..326710 (-) 861 WP_097114789.1 transporter substrate-binding domain-containing protein -
  JF568_RS01660 (JF568_01660) purB 326916..328286 (-) 1371 WP_097114790.1 adenylosuccinate lyase -
  JF568_RS01665 (JF568_01665) - 328322..328903 (-) 582 WP_097114791.1 Uma2 family endonuclease -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 18080.70 Da        Isoelectric Point: 9.9748

>NTDB_id=608578 JF568_RS01645 WP_097114858.1 324108..324572(-) (recX) [Alysiella filiformis DSM 16848]
MSDKPHTEKSLRVRAMEMMSRREMSRLELQRKLAPHAQDETELTRVLDEFANKNWQSDERFTEMWVRGKSAKHGRLRLQQ
ELAAKGVSRDIIAEHLPDSESELHNACEVLRKKFRQPAQNIAEKQKQMRFMLYRGFGMDTVQAALKQAWLDDGI

Nucleotide


Download         Length: 465 bp        

>NTDB_id=608578 JF568_RS01645 WP_097114858.1 324108..324572(-) (recX) [Alysiella filiformis DSM 16848]
ATGAGCGATAAACCCCATACCGAAAAAAGCCTGCGCGTTCGGGCAATGGAAATGATGTCGCGCCGCGAAATGAGCCGCTT
GGAATTGCAACGCAAACTCGCGCCCCACGCGCAAGATGAAACCGAATTGACGCGCGTGTTGGACGAATTTGCCAACAAAA
ATTGGCAATCCGATGAACGCTTTACCGAAATGTGGGTGCGTGGCAAAAGTGCCAAACACGGGCGTTTGCGTTTGCAACAA
GAATTGGCGGCAAAAGGCGTGAGCCGCGACATCATTGCCGAACATTTGCCCGATTCGGAAAGCGAATTGCACAATGCCTG
TGAAGTGTTGCGCAAAAAATTCAGGCAGCCTGCACAAAATATCGCCGAAAAACAAAAACAAATGCGTTTTATGCTGTATC
GCGGATTTGGCATGGACACGGTTCAGGCAGCCTTAAAACAGGCTTGGCTTGATGATGGTATTTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-147)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A286EG80

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

58.451

92.208

0.539