Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JF634_RS02560 Genome accession   NZ_CP083930
Coordinates   507248..507715 (-) Length   155 a.a.
NCBI ID   WP_002640986.1    Uniprot ID   V9HMT0
Organism   Simonsiella muelleri strain DSM 2579     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 502248..512715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JF634_RS12530 - 503291..503422 (-) 132 WP_263479606.1 hypothetical protein -
  JF634_RS02540 (JF634_02540) - 503443..504582 (+) 1140 WP_002640982.1 SPOR domain-containing protein -
  JF634_RS02545 (JF634_02545) - 504647..505345 (+) 699 WP_002640983.1 thiol:disulfide interchange protein DsbA/DsbL -
  JF634_RS02550 (JF634_02550) - 505542..506366 (+) 825 WP_002640984.1 undecaprenyl-diphosphate phosphatase -
  JF634_RS02555 (JF634_02555) deoD 506385..507095 (+) 711 WP_002640985.1 purine-nucleoside phosphorylase -
  JF634_RS02560 (JF634_02560) recX 507248..507715 (-) 468 WP_002640986.1 recombination regulator RecX Regulator
  JF634_RS02565 (JF634_02565) - 507718..508413 (-) 696 WP_002640987.1 phosphoglycolate phosphatase -
  JF634_RS02570 (JF634_02570) - 508431..508793 (-) 363 WP_002640988.1 Mth938-like domain-containing protein -
  JF634_RS02575 (JF634_02575) - 508880..509776 (-) 897 WP_002640989.1 hypothetical protein -
  JF634_RS02580 (JF634_02580) - 509880..510338 (-) 459 WP_002640990.1 hypothetical protein -
  JF634_RS02585 (JF634_02585) - 510331..511638 (-) 1308 WP_002640991.1 homoserine dehydrogenase -
  JF634_RS02590 (JF634_02590) - 511778..512698 (-) 921 WP_002640992.1 lysine exporter LysO family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 18069.44 Da        Isoelectric Point: 6.4943

>NTDB_id=608554 JF634_RS02560 WP_002640986.1 507248..507715(-) (recX) [Simonsiella muelleri strain DSM 2579]
MPKAEKSLKSRALEYLSRREMSKLELKRKLAPYAEDEAEIDAVLAEFADLNWQSDERFTESFMNSKSRKHGRMRLQQALT
QKGVDADIIAEYLPNAEEELAHACEVLRKKFRQPAKNINEKQRQTRFLLYRGFGYDIIQQALNLAWQDADDVSSE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=608554 JF634_RS02560 WP_002640986.1 507248..507715(-) (recX) [Simonsiella muelleri strain DSM 2579]
ATGCCCAAAGCCGAAAAATCATTAAAAAGCCGTGCGTTGGAATATTTATCGCGCCGTGAAATGAGTAAGTTGGAATTAAA
ACGTAAACTTGCGCCTTACGCCGAAGACGAAGCAGAAATTGATGCAGTACTGGCGGAATTTGCGGATTTGAATTGGCAAT
CAGATGAACGATTTACCGAGTCGTTTATGAACAGCAAATCGCGCAAACATGGGCGAATGCGGTTGCAACAAGCCTTGACG
CAAAAAGGCGTGGATGCGGACATCATCGCCGAATATTTGCCTAATGCAGAAGAAGAATTGGCGCACGCTTGCGAAGTATT
ACGTAAAAAATTTAGGCAGCCTGCAAAAAATATCAATGAAAAACAAAGACAAACGCGTTTTTTATTGTATCGTGGTTTTG
GTTACGACATCATTCAGCAAGCCTTAAATTTAGCGTGGCAAGATGCGGATGATGTGTCCAGCGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(36-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB V9HMT0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

54.861

92.903

0.51