Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KE3_RS07330 Genome accession   NC_021900
Coordinates   1458119..1458928 (-) Length   269 a.a.
NCBI ID   WP_020917220.1    Uniprot ID   A0AB33AMU0
Organism   Streptococcus lutetiensis 033     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1453119..1463928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS07320 (KE3_1502) smc 1453520..1457059 (-) 3540 WP_020917218.1 chromosome segregation protein SMC -
  KE3_RS07325 (KE3_1503) rnc 1457212..1457898 (-) 687 WP_020917219.1 ribonuclease III -
  KE3_RS07330 (KE3_1504) vicX 1458119..1458928 (-) 810 WP_020917220.1 MBL fold metallo-hydrolase Regulator
  KE3_RS07335 (KE3_1505) vicK 1458929..1460281 (-) 1353 WP_020917221.1 cell wall metabolism sensor histidine kinase VicK Regulator
  KE3_RS07340 (KE3_1506) vicR 1460274..1460984 (-) 711 WP_020917222.1 response regulator YycF Regulator
  KE3_RS07345 (KE3_1507) - 1461296..1462054 (+) 759 WP_020917223.1 amino acid ABC transporter ATP-binding protein -
  KE3_RS07350 (KE3_1508) - 1462071..1462883 (+) 813 WP_020917224.1 transporter substrate-binding domain-containing protein -
  KE3_RS07355 (KE3_1509) - 1462899..1463606 (+) 708 WP_020917225.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30068.98 Da        Isoelectric Point: 5.7857

>NTDB_id=60834 KE3_RS07330 WP_020917220.1 1458119..1458928(-) (vicX) [Streptococcus lutetiensis 033]
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANAKTWQTIDERNMIGKLDVGQKHVFERGKTLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMKADFAVGHDMTVFDTSPDEAMPLAGL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=60834 KE3_RS07330 WP_020917220.1 1458119..1458928(-) (vicX) [Streptococcus lutetiensis 033]
ATGTCTGAGAATGCTTTTAAATACAGTGTCTTAGCCTCCGGTTCAACTGGAAATTCATTTTATGTGGAAACGCCACAGAA
ACGTCTTTTGATAGATGCAGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGAAAACCAGAAGATT
TGGATGCTATTTTGATTACGCACGAACACTCTGACCATATTAAAGGAGTTGGAGTGCTGGCTCGCAGATACAATCTTGAT
GTATATGCCAATGCCAAAACTTGGCAAACGATTGATGAGCGCAACATGATTGGAAAACTTGACGTTGGGCAAAAACATGT
CTTTGAACGTGGTAAAACATTGACTTTTGGTGATATTGATATTGAAAGTTTTGGAGTCAGTCACGATGCTGTCGATCCGC
AATTTTACCGTTTGATGAAAGATAATAAGTCATTTGTCGTTCTGACAGATACGGGTTACGTTAGTGACCGAATGGCGGGT
GTGATTGAAAATGCTGATGGTTATCTGATTGAGTCAAACCATGATGTTGAGATTTTGCGTGCAGGTTCTTATCCATGGAG
CTTGAAACAACGTATTCTATCTGATCGTGGTCACTTGTCAAATGAAGATGGTGCTGATACCATGATTCGTACTATCGGCA
ACCGCACAAAGAAAATTTACCTTGGTCACTTGAGTAAAGAAAATAATATCAAAGAATTGGCTCATATGACTATGGAAAAT
AACTTGATGAAAGCCGATTTTGCTGTTGGTCATGACATGACCGTTTTTGATACATCACCTGATGAAGCAATGCCTTTAGC
AGGTCTATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.903

99.257

0.773

Multiple sequence alignment