Detailed information NTG0608299

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD31_RS22795
• Genome accession: NZ_CP100987
• Coordinates: 4639921..4640946 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET210
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4634921..4645946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD31_RS22775 (NMD31_22660)	metJ	4635982..4636299 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD31_RS22780 (NMD31_22665)	yiiX	4636483..4637091 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD31_RS22785 (NMD31_22670)	rpmE	4637152..4637364 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD31_RS22790 (NMD31_22675)	priA	4637567..4639765 (+)	2199	WP_001735949.1	primosomal protein N'	Machinery gene
NMD31_RS22795 (NMD31_22680)	cytR	4639921..4640946 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD31_RS22800 (NMD31_22685)	ftsN	4641038..4641964 (+)	927	WP_094312984.1	cell division protein FtsN	-
NMD31_RS22805 (NMD31_22690)	hslV	4642057..4642587 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD31_RS22810 (NMD31_22695)	hslU	4642597..4643928 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD31_RS22815 (NMD31_22700)	menA	4643995..4644921 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD31_RS22820 (NMD31_22705)	rraA	4645014..4645499 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD31_RS22825 (NMD31_22710)	zapB	4645584..4645829 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=608299 NMD31_RS22795 WP_000644904.1 4639921..4640946(+) (cytR) [Escherichia coli strain ET210]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=608299 NMD31_RS22795 WP_000644904.1 4639921..4640946(+) (cytR) [Escherichia coli strain ET210]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628