Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   KE3_RS02595 Genome accession   NC_021900
Coordinates   477028..478113 (+) Length   361 a.a.
NCBI ID   WP_020916344.1    Uniprot ID   -
Organism   Streptococcus lutetiensis 033     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 472028..483113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS11185 - 472111..472410 (+) 300 Protein_452 macrolide ABC transporter permease -
  KE3_RS10750 - 472389..472592 (+) 204 WP_197708498.1 hypothetical protein -
  KE3_RS02570 (KE3_0524) asnA 472970..473962 (+) 993 WP_020916339.1 aspartate--ammonia ligase -
  KE3_RS02575 (KE3_0525) - 474066..474800 (-) 735 WP_020916340.1 hypothetical protein -
  KE3_RS02580 (KE3_0526) - 474972..475850 (-) 879 WP_020916341.1 hypothetical protein -
  KE3_RS02585 (KE3_0527) rsmD 475982..476521 (+) 540 WP_043895197.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  KE3_RS02590 (KE3_0528) coaD 476553..477050 (+) 498 WP_020916343.1 pantetheine-phosphate adenylyltransferase -
  KE3_RS02595 (KE3_0529) sepM 477028..478113 (+) 1086 WP_020916344.1 SepM family pheromone-processing serine protease Regulator
  KE3_RS02600 (KE3_0530) - 478244..478492 (+) 249 WP_043894978.1 DUF3923 family protein -
  KE3_RS02605 (KE3_0531) - 478597..479925 (+) 1329 WP_043894980.1 bifunctional metallophosphatase/5'-nucleotidase -
  KE3_RS02610 (KE3_0532) - 479955..480516 (+) 562 Protein_462 YutD family protein -
  KE3_RS02615 (KE3_0533) rlmN 480537..481637 (+) 1101 WP_020916348.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  KE3_RS02620 (KE3_0534) - 481647..482153 (+) 507 WP_020916349.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39221.49 Da        Isoelectric Point: 5.4865

>NTDB_id=60817 KE3_RS02595 WP_020916344.1 477028..478113(+) (sepM) [Streptococcus lutetiensis 033]
MTILNAFKGILKKLGRILYRFKWWILGVVGTVFLIFSLFYPLDYYVEMPGGAYDVRSVLTVNNKTDKDEGSYNFVAVTVN
QATLAQLVYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTIQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIESDGSVGDIGGAGLKVVSAAKSGADIFFIPNNPVDKETLKK
NPDAKTNYEEAKEAAKGLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=60817 KE3_RS02595 WP_020916344.1 477028..478113(+) (sepM) [Streptococcus lutetiensis 033]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTTAAATGGTGGATACTAGG
AGTAGTGGGAACTGTATTTCTTATCTTTAGTTTATTTTATCCCCTCGACTATTATGTTGAAATGCCTGGCGGCGCTTATG
ATGTTCGTAGTGTTTTGACTGTTAATAACAAAACAGATAAAGATGAAGGCTCTTATAACTTTGTAGCGGTGACGGTGAAT
CAAGCGACGCTTGCTCAGCTGGTTTATGCTTGGTTAACACCGCATACGGAGATTTCAACGGCTGCCGCAACAACAGGGGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTACATGGAAACTTCACAAAATACAGCGACTTACCAAGCTTTAA
CCCTAGCAGGAAAAGATGTTAAGCTTGATTATCAGGGTGTTTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGAAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTATTCAAGAAATTTCAAATGGTAAAACAAAAGAGGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGCATTGGTTTAGTCGATCATACCAAGGTGTCATCTGATGTCGATGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGACCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTGAATCAGATGGTTCTGTTGGTGATATCGGCGGAGCAGGCTTAA
AAGTTGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTATTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
AATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAGGCCTTGATACAGACATGAAAATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACCTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.552

93.906

0.634


Multiple sequence alignment