Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   KE3_RS02025 Genome accession   NC_021900
Coordinates   366103..366828 (+) Length   241 a.a.
NCBI ID   WP_020916250.1    Uniprot ID   A0AB33AK32
Organism   Streptococcus lutetiensis 033     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 361103..371828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS01995 (KE3_0408) - 361517..362938 (+) 1422 WP_020916244.1 NCS2 family permease -
  KE3_RS02000 (KE3_0409) tsaE 363114..363557 (+) 444 WP_020916245.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  KE3_RS02005 (KE3_0410) - 363550..364062 (+) 513 WP_020916246.1 GNAT family N-acetyltransferase -
  KE3_RS02010 (KE3_0411) brpA 364073..365233 (+) 1161 WP_020916247.1 biofilm formation/cell division transcriptional regulator BrpA -
  KE3_RS02015 (KE3_0412) - 365318..365623 (-) 306 WP_020916248.1 hypothetical protein -
  KE3_RS02020 (KE3_0413) - 365620..366039 (-) 420 WP_020916249.1 HIT family protein -
  KE3_RS02025 (KE3_0414) pptA 366103..366828 (+) 726 WP_020916250.1 ABC transporter ATP-binding protein Regulator
  KE3_RS02030 (KE3_0415) - 366831..367865 (+) 1035 WP_020916251.1 ABC transporter permease -
  KE3_RS02035 (KE3_0416) ccrZ 367918..368739 (+) 822 WP_043894957.1 cell cycle regulator CcrZ -
  KE3_RS02040 (KE3_0417) trmB 368739..369377 (+) 639 WP_020916253.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KE3_RS02050 (KE3_0418) - 369742..370773 (+) 1032 WP_043894958.1 sensor domain-containing diguanylate cyclase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26770.15 Da        Isoelectric Point: 4.6835

>NTDB_id=60812 KE3_RS02025 WP_020916250.1 366103..366828(+) (pptA) [Streptococcus lutetiensis 033]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLDFDQAMARAKELLKIFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPYLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGQEDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=60812 KE3_RS02025 WP_020916250.1 366103..366828(+) (pptA) [Streptococcus lutetiensis 033]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTCGGCTTGATTGGGCTAAATGGTGCTGGGAAGTCAACGACGATTAATGAAGTTATCGGACTTTTGACGCCTT
ATCAAGGAAAGATTACGCTTGACGGCTTGACTTTGGCTGATAACCAAGCAGAGTATCGCAAAAAGATTGGCTTTATTCCT
GAAACGCCAAGCTTGTATGAAGAGTTAACTTTACGTGAGCATTTAGAGACGGTTGCTATGGCTTATGACCTTGATTTTGA
TCAAGCGATGGCGCGTGCTAAGGAATTGCTAAAAATTTTCCGTCTGTCTGATAAGCTTGAATGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTTATGATTGTGTGCGCCTTTATGATTGATCCTTATTTGTTTATCGTTGATGAGCCATTT
TTGGGACTAGATCCTTTGGCGATTTCTGATTTAACGGATTTGCTAGCGCAGGAAAAAGCAAAAGGCAAAGCTATTTTGAT
GTCAACACACGTGTTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCATGGTCAAGTGCGTGCAATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGTCAAGAAGATGCTAGTTTGAACGATATTTACATAGCTTTAACTAAAGAG
GGATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763
  pptA Streptococcus thermophilus LMD-9

75.732

99.17

0.751

Multiple sequence alignment