Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LB317_RS12855 Genome accession   NZ_CP083805
Coordinates   2668536..2669201 (-) Length   221 a.a.
NCBI ID   WP_000697875.1    Uniprot ID   -
Organism   Staphylococcus argenteus strain 1801221     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2663536..2674201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LB317_RS12840 (LB317_12850) - 2664773..2666779 (-) 2007 WP_031788272.1 ABC transporter permease -
  LB317_RS12845 (LB317_12855) - 2666776..2667531 (-) 756 WP_239794162.1 ABC transporter ATP-binding protein -
  LB317_RS12850 (LB317_12860) braS 2667638..2668525 (-) 888 WP_031788274.1 sensor histidine kinase Regulator
  LB317_RS12855 (LB317_12865) braR 2668536..2669201 (-) 666 WP_000697875.1 response regulator transcription factor Regulator
  LB317_RS12860 (LB317_12870) - 2669237..2669422 (-) 186 WP_000604733.1 hypothetical protein -
  LB317_RS12865 (LB317_12875) - 2669612..2669836 (-) 225 Protein_2493 ATP-binding protein -
  LB317_RS12870 (LB317_12880) - 2669817..2670190 (+) 374 Protein_2494 transposase -
  LB317_RS12875 (LB317_12885) - 2670222..2670776 (-) 555 WP_031788277.1 TetR/AcrR family transcriptional regulator -
  LB317_RS12880 (LB317_12890) - 2670955..2671869 (+) 915 WP_031788278.1 alpha/beta hydrolase -
  LB317_RS12885 (LB317_12895) - 2671890..2672528 (+) 639 WP_031788279.1 SDR family oxidoreductase -
  LB317_RS12890 (LB317_12900) - 2672599..2673309 (+) 711 WP_000193375.1 dihydrofolate reductase family protein -
  LB317_RS12895 (LB317_12905) - 2673324..2674076 (+) 753 WP_031788280.1 SDR family NAD(P)-dependent oxidoreductase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25270.26 Da        Isoelectric Point: 4.7961

>NTDB_id=608046 LB317_RS12855 WP_000697875.1 2668536..2669201(-) (braR) [Staphylococcus argenteus strain 1801221]
MKILIVEDDFVIAESLASELKKWNYDVVVAEQFDNITAVFNNHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIMFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVVNDTLTVKGCTLILDEAKVAYQGESIQLSLTELQILK
LLFQSEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLSTIGLNDFITTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=608046 LB317_RS12855 WP_000697875.1 2668536..2669201(-) (braR) [Staphylococcus argenteus strain 1801221]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCGGAAAGTTTAGCATCTGAATTAAAAAAATGGAATTATGATGT
GGTTGTGGCAGAACAGTTTGATAATATAACAGCCGTTTTTAACAATCATCAACCACAGCTTGTGCTGTTAGATATCAATT
TACCTACTTTAAATGGTTTTCATTGGTGCCAAGAAATACGCAAAACATCAAATGTACCTATCATGTTTATTAGTTCGCGT
ATTGATAACATGGATCAAATTATGGCTATACAAATGGGTGGCGATGATTTTATTGAAAAACCATTCAATTTGTCATTAAC
TATTGCTAAAATTCAAGCGCTTTTAAGACGTACTTATGATCTAACAGTAGTCAATGATACGCTGACAGTCAAAGGGTGTA
CGCTAATATTAGATGAGGCTAAGGTTGCTTATCAAGGGGAGAGTATACAGCTGTCTTTGACGGAATTACAAATTTTAAAA
TTGTTGTTCCAAAGCGAAGACAAGTATGTGAGTCGAACAGCTTTAATTGAAAAATGCTGGGAGTCTGAAAACTTCATAGA
TGATAATACATTAGCAGTAAATATGACACGTCTACGTAAAAAATTAAGTACTATAGGCCTCAATGATTTTATCACTACCA
AGAAAAATGTTGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

90.95

100

0.91