Detailed information NTG0607862

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: LAZ98_RS19360
• Genome accession: NZ_CP083764
• Coordinates: 3793644..3794789 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DMB07
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3788644..3799789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAZ98_RS19340 (LAZ98_19340)	fnr	3789118..3789834 (-)	717	WP_224443418.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
LAZ98_RS19345 (LAZ98_19345)	narK	3789932..3791122 (-)	1191	WP_224443419.1	nitrate transporter NarK	-
LAZ98_RS19350 (LAZ98_19350)	argS	3791257..3792927 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
LAZ98_RS19355 (LAZ98_19355)	-	3792924..3793352 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
LAZ98_RS19360 (LAZ98_19360)	rapF	3793644..3794789 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
LAZ98_RS19365 (LAZ98_19365)	-	3794773..3794892 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
LAZ98_RS19370 (LAZ98_19370)	speB	3795015..3795887 (-)	873	WP_003151054.1	agmatinase	-
LAZ98_RS19375 (LAZ98_19375)	speE	3795947..3796777 (-)	831	WP_017418706.1	spermidine synthase	-
LAZ98_RS19380 (LAZ98_19380)	-	3796977..3799049 (+)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
LAZ98_RS19385 (LAZ98_19385)	-	3799074..3799505 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=607862 LAZ98_RS19360 WP_024085922.1 3793644..3794789(+) (rapF) [Bacillus velezensis strain DMB07]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=607862 LAZ98_RS19360 WP_024085922.1 3793644..3794789(+) (rapF) [Bacillus velezensis strain DMB07]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGCCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533