Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   LAZ98_RS05895 Genome accession   NZ_CP083764
Coordinates   1131534..1132487 (+) Length   317 a.a.
NCBI ID   WP_014417407.1    Uniprot ID   A0AAP4DIE0
Organism   Bacillus velezensis strain DMB07     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1126534..1137487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAZ98_RS05870 (LAZ98_05870) argF 1128350..1129321 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  LAZ98_RS05875 (LAZ98_05875) - 1129397..1129576 (+) 180 WP_003155070.1 YjzC family protein -
  LAZ98_RS05880 (LAZ98_05880) - 1129613..1129798 (-) 186 WP_007409129.1 YjzD family protein -
  LAZ98_RS05885 (LAZ98_05885) - 1130059..1130794 (+) 736 Protein_1093 hypothetical protein -
  LAZ98_RS05890 (LAZ98_05890) - 1130877..1131443 (+) 567 WP_025649580.1 hypothetical protein -
  LAZ98_RS05895 (LAZ98_05895) med 1131534..1132487 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  LAZ98_RS05900 (LAZ98_05900) comZ 1132500..1132691 (+) 192 WP_017417446.1 ComZ family protein Regulator
  LAZ98_RS05905 (LAZ98_05905) - 1132720..1132938 (-) 219 WP_007409123.1 hypothetical protein -
  LAZ98_RS05910 (LAZ98_05910) - 1133106..1134044 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  LAZ98_RS05915 (LAZ98_05915) fabF 1134067..1135305 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  LAZ98_RS05920 (LAZ98_05920) - 1135389..1136174 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  LAZ98_RS05925 (LAZ98_05925) - 1136348..1137334 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35343.93 Da        Isoelectric Point: 4.6686

>NTDB_id=607810 LAZ98_RS05895 WP_014417407.1 1131534..1132487(+) (med) [Bacillus velezensis strain DMB07]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=607810 LAZ98_RS05895 WP_014417407.1 1131534..1132487(+) (med) [Bacillus velezensis strain DMB07]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGGACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

77.918

100

0.779