Detailed information NTG0607786

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: LAZ97_RS19035
• Genome accession: NZ_CP083763
• Coordinates: 3789651..3790796 (+)
• Length: 381 a.a.
• NCBI ID: WP_079891436.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DMB06
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3784651..3795796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAZ97_RS19015 (LAZ97_19015)	fnr	3785125..3785841 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
LAZ97_RS19020 (LAZ97_19020)	-	3785939..3787129 (-)	1191	WP_129093797.1	NarK/NasA family nitrate transporter	-
LAZ97_RS19025 (LAZ97_19025)	argS	3787264..3788934 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
LAZ97_RS19030 (LAZ97_19030)	-	3788931..3789359 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
LAZ97_RS19035 (LAZ97_19035)	rapF	3789651..3790796 (+)	1146	WP_079891436.1	Rap family tetratricopeptide repeat protein	Regulator
LAZ97_RS19040 (LAZ97_19040)	-	3790780..3790899 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
LAZ97_RS19045 (LAZ97_19045)	speB	3791022..3791894 (-)	873	WP_003151054.1	agmatinase	-
LAZ97_RS19050 (LAZ97_19050)	speE	3791954..3792784 (-)	831	WP_017418706.1	spermidine synthase	-
LAZ97_RS19055 (LAZ97_19055)	-	3792984..3795056 (+)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
LAZ97_RS19060 (LAZ97_19060)	-	3795081..3795512 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45816.31 Da
• Isoelectric Point: 5.0722

>NTDB_id=607786 LAZ97_RS19035 WP_079891436.1 3789651..3790796(+) (rapF) [Bacillus velezensis strain DMB06]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYFIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=607786 LAZ97_RS19035 WP_079891436.1 3789651..3790796(+) (rapF) [Bacillus velezensis strain DMB06]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTCATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533