Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LAZ97_RS05880 Genome accession   NZ_CP083763
Coordinates   1136291..1136482 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain DMB06     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131291..1141482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAZ97_RS05850 (LAZ97_05850) - 1131922..1133072 (+) 1151 WP_087614160.1 IS3 family transposase -
  LAZ97_RS05855 (LAZ97_05855) - 1133188..1133367 (+) 180 WP_003155070.1 YjzC family protein -
  LAZ97_RS05860 (LAZ97_05860) - 1133404..1133589 (-) 186 WP_007409129.1 YjzD family protein -
  LAZ97_RS05865 (LAZ97_05865) - 1133850..1134585 (+) 736 Protein_1092 hypothetical protein -
  LAZ97_RS05870 (LAZ97_05870) - 1134668..1135234 (+) 567 WP_032863798.1 hypothetical protein -
  LAZ97_RS05875 (LAZ97_05875) med 1135325..1136278 (+) 954 WP_017417445.1 BMP family ABC transporter substrate-binding protein Regulator
  LAZ97_RS05880 (LAZ97_05880) comZ 1136291..1136482 (+) 192 WP_003155061.1 ComZ family protein Regulator
  LAZ97_RS05885 (LAZ97_05885) - 1136511..1136729 (-) 219 WP_007409123.1 hypothetical protein -
  LAZ97_RS05890 (LAZ97_05890) - 1136897..1137835 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  LAZ97_RS05895 (LAZ97_05895) fabF 1137857..1139095 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  LAZ97_RS05900 (LAZ97_05900) - 1139179..1139964 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  LAZ97_RS05905 (LAZ97_05905) - 1140138..1141124 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=607734 LAZ97_RS05880 WP_003155061.1 1136291..1136482(+) (comZ) [Bacillus velezensis strain DMB06]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=607734 LAZ97_RS05880 WP_003155061.1 1136291..1136482(+) (comZ) [Bacillus velezensis strain DMB06]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794