Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   K8M08_RS20160 Genome accession   NZ_CP083749
Coordinates   3886868..3887662 (+) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus sp. CRB-7     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3881868..3892662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8M08_RS20145 (K8M08_20145) argR 3882707..3883156 (+) 450 WP_001032581.1 arginine repressor ArgR -
  K8M08_RS20150 (K8M08_20150) recN 3883424..3885163 (+) 1740 WP_000947746.1 DNA repair protein RecN Machinery gene
  K8M08_RS20155 (K8M08_20155) spoIVB 3885282..3886580 (+) 1299 WP_003267478.1 SpoIVB peptidase -
  K8M08_RS20160 (K8M08_20160) spo0A 3886868..3887662 (+) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  K8M08_RS20165 (K8M08_20165) - 3887958..3889484 (+) 1527 WP_000216568.1 glycosyltransferase family 39 protein -
  K8M08_RS20170 (K8M08_20170) - 3889652..3889798 (-) 147 WP_001247671.1 YycC family protein -
  K8M08_RS20175 (K8M08_20175) - 3889850..3890578 (+) 729 WP_042989520.1 glycerophosphodiester phosphodiesterase -
  K8M08_RS20180 (K8M08_20180) - 3890628..3890861 (-) 234 WP_001190188.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=607669 K8M08_RS20160 WP_033686380.1 3886868..3887662(+) (spo0A) [Bacillus sp. CRB-7]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=607669 K8M08_RS20160 WP_033686380.1 3886868..3887662(+) (spo0A) [Bacillus sp. CRB-7]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCAGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGTCAAGAAGATGTGACGAAAAAAGCGGTTGACTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAATTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATATATGTATTTAAGAGAAGCAATCTCTATGGTGTACAACGATATCGAATTACT
TGGATCTATTACAAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCATGCAATTGAAGTAGCGTGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATTGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818