Detailed information NTG0607655

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: K8M08_RS15125
• Genome accession: NZ_CP083749
• Coordinates: 2969984..2971333 (+)
• Length: 449 a.a.
• NCBI ID: WP_000457321.1
• Uniprot ID: -
• Organism: Bacillus sp. CRB-7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2964984..2976333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8M08_RS15105 (K8M08_15105)	-	2966086..2966721 (-)	636	WP_000926681.1	YigZ family protein	-
K8M08_RS15110 (K8M08_15110)	-	2966961..2967803 (+)	843	WP_000844763.1	DegV family protein	-
K8M08_RS15115 (K8M08_15115)	-	2967977..2968291 (+)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
K8M08_RS15120 (K8M08_15120)	-	2968438..2969856 (+)	1419	WP_003268117.1	NlpC/P60 family protein	-
K8M08_RS15125 (K8M08_15125)	comFA	2969984..2971333 (+)	1350	WP_000457321.1	ATP-dependent helicase ComFA	Machinery gene
K8M08_RS15130 (K8M08_15130)	-	2971333..2972037 (+)	705	WP_001975266.1	ComF family protein	-
K8M08_RS15135 (K8M08_15135)	cspC	2972164..2972361 (+)	198	WP_001990088.1	cold shock protein CspC	-
K8M08_RS15140 (K8M08_15140)	hpf	2972685..2973227 (+)	543	WP_000671191.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
K8M08_RS15145 (K8M08_15145)	secA	2973502..2976009 (+)	2508	WP_000579383.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51166.69 Da
• Isoelectric Point: 9.3729

>NTDB_id=607655 K8M08_RS15125 WP_000457321.1 2969984..2971333(+) (comFA) [Bacillus sp. CRB-7]
MFAGKQLLLEEISSDLRRELSDLKEKGEIVCVQGVIKRDSKYICQRCGNIEQRLFASFLCKRCGKACMYCRKCITMGRVS
ECTVLVRGIHERKGERELNSLQWKGALTTGQELAAQGVIEAIQQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVMELAPRLQEVFPSINVAALYGGSVDHEKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEDVSLLLKGLDNRIDGVHAEDPMRKEKVTSFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEVFSESALV
QIAGRAGRSFEEPCGEVMYFHYGKTEAMVRAKKHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=607655 K8M08_RS15125 WP_000457321.1 2969984..2971333(+) (comFA) [Bacillus sp. CRB-7]
ATGTTTGCTGGGAAACAGTTGCTATTAGAAGAAATATCTTCAGACTTAAGGAGAGAATTAAGTGATTTAAAAGAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAATAAAGAGGGATTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGAC
TATTTGCATCATTTTTATGTAAAAGATGCGGTAAAGCATGCATGTATTGCCGGAAGTGTATAACGATGGGTAGAGTTAGT
GAATGTACTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGCGAAAGGGAATTAAATTCGTTACAGTGGAAAGGTGCATT
GACTACTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCGATTCAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACGGACGTTGTAATGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGACGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAACAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCAGGAAGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTATTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGATGTGAGTCTGTTATTGAAAGGGTTGGATAATCGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGACATCCTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCGGAAGAAGAAGTTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCTTGTGGCGAGGTTATGTATTTTCATTACGGTAAGACAGAAGC
GATGGTACGTGCGAAAAAACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTGATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (107-254)

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.922	96.659	0.492
comFA	Latilactobacillus sakei subsp. sakei 23K	41.481	90.2	0.374