Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K8M08_RS07905 Genome accession   NZ_CP083749
Coordinates   1537417..1537593 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus sp. CRB-7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1532417..1542593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8M08_RS07885 (K8M08_07885) - 1533027..1533773 (-) 747 WP_000966137.1 YjbA family protein -
  K8M08_RS07890 (K8M08_07890) - 1533917..1534705 (-) 789 WP_000539322.1 DUF2268 domain-containing protein -
  K8M08_RS07895 (K8M08_07895) fabF 1534812..1536050 (-) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  K8M08_RS07900 (K8M08_07900) fabH 1536082..1537014 (-) 933 WP_001100542.1 beta-ketoacyl-ACP synthase III -
  K8M08_RS07905 (K8M08_07905) comZ 1537417..1537593 (-) 177 WP_009879752.1 ComZ family protein Regulator
  K8M08_RS07910 (K8M08_07910) - 1537647..1538519 (-) 873 WP_000486164.1 NAD-dependent epimerase/dehydratase family protein -
  K8M08_RS07915 (K8M08_07915) - 1538549..1539283 (-) 735 WP_000028705.1 hypothetical protein -
  K8M08_RS07920 (K8M08_07920) - 1539440..1539622 (+) 183 WP_001211116.1 YjzD family protein -
  K8M08_RS07925 (K8M08_07925) clpC 1539660..1542260 (-) 2601 WP_000365389.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=607637 K8M08_RS07905 WP_009879752.1 1537417..1537593(-) (comZ) [Bacillus sp. CRB-7]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=607637 K8M08_RS07905 WP_009879752.1 1537417..1537593(-) (comZ) [Bacillus sp. CRB-7]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCGAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGAA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586