Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   LAZ96_RS12250 Genome accession   NZ_CP083715
Coordinates   2383255..2384208 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain DMB05     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2378255..2389208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAZ96_RS12225 (LAZ96_12225) - 2378299..2379726 (+) 1428 WP_106067998.1 HAMP domain-containing sensor histidine kinase -
  LAZ96_RS12230 (LAZ96_12230) rapC 2379885..2381033 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  LAZ96_RS12235 (LAZ96_12235) phrC 2381017..2381136 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  LAZ96_RS12240 (LAZ96_12240) - 2381287..2381397 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  LAZ96_RS12245 (LAZ96_12245) - 2381477..2382841 (-) 1365 WP_110085395.1 aspartate kinase -
  LAZ96_RS12250 (LAZ96_12250) ceuB 2383255..2384208 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  LAZ96_RS12255 (LAZ96_12255) - 2384198..2385145 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  LAZ96_RS12260 (LAZ96_12260) - 2385139..2385897 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  LAZ96_RS12265 (LAZ96_12265) - 2385919..2386863 (+) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  LAZ96_RS12270 (LAZ96_12270) - 2386905..2388329 (-) 1425 WP_025649997.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=607422 LAZ96_RS12250 WP_015239156.1 2383255..2384208(+) (ceuB) [Bacillus velezensis strain DMB05]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=607422 LAZ96_RS12250 WP_015239156.1 2383255..2384208(+) (ceuB) [Bacillus velezensis strain DMB05]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCAACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTTCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536