Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   K9N66_RS02120 Genome accession   NZ_CP083695
Coordinates   461708..463387 (+) Length   559 a.a.
NCBI ID   WP_224434594.1    Uniprot ID   -
Organism   Enterococcus mundtii strain P6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 456708..468387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9N66_RS02090 (K9N66_02090) - 457007..457861 (+) 855 WP_224434592.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  K9N66_RS02095 (K9N66_02095) xseA 457858..459198 (+) 1341 WP_224434593.1 exodeoxyribonuclease VII large subunit -
  K9N66_RS02100 (K9N66_02100) - 459200..459427 (+) 228 WP_194179766.1 exodeoxyribonuclease VII small subunit -
  K9N66_RS02105 (K9N66_02105) - 459424..460311 (+) 888 WP_062805515.1 polyprenyl synthetase family protein -
  K9N66_RS02110 (K9N66_02110) - 460320..461141 (+) 822 WP_010735996.1 TlyA family RNA methyltransferase -
  K9N66_RS02115 (K9N66_02115) - 461241..461690 (+) 450 WP_010735995.1 arginine repressor -
  K9N66_RS02120 (K9N66_02120) recN 461708..463387 (+) 1680 WP_224434594.1 DNA repair protein RecN Machinery gene
  K9N66_RS02125 (K9N66_02125) - 464241..465776 (+) 1536 WP_224434595.1 hypothetical protein -
  K9N66_RS02130 (K9N66_02130) - 465831..466445 (+) 615 WP_010735992.1 hypothetical protein -
  K9N66_RS02135 (K9N66_02135) - 466812..467339 (+) 528 WP_224434596.1 hypothetical protein -
  K9N66_RS02140 (K9N66_02140) - 467296..467835 (+) 540 WP_224434597.1 hypothetical protein -
  K9N66_RS02145 (K9N66_02145) - 467929..468105 (+) 177 WP_224434598.1 hypothetical protein -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 62861.90 Da        Isoelectric Point: 4.4683

>NTDB_id=607297 K9N66_RS02120 WP_224434594.1 461708..463387(+) (recN) [Enterococcus mundtii strain P6]
MLQEISITNFAIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGADKCILEGLFEWPKQEGFEALM
EELGIESDGSNLIVRRDMSLAGKNVCRVNGHIVTLANLRRVGSYLVDIQGQNEHQELLQPESHLVLLDRFGDSTFQQKKR
AYQEAYQAYRELERKVRKIQQNEKNYVQRIDMLNFQQEEIAAAQLEVGEEEKLREERDKLSNYQKIVDGLATAYGALSEG
EQSSLDGVGRAVSEIQSIAHLDSEYEAIFDNIQSAYYLLQDAVGDMSRQIDLLELDENRLEEVTQRMETIRQLKRKYGDS
VEAILAYYEEITEELDSSDFTEGQLDKMKNELTQKEEWAFQCAEELHQARKAIASDLEQSILRELKSLYMENTEFEVRFS
TQANGRLDEQGFDIVEFYITTNPGEPLKPLVKVASGGELSRVLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
LKISKYSQVLCITHLPQVAAVADYQYYIVKEVVGGRTQTSVAELAAAERENEIARMLAGSEITPLTIEHAKELLRLAKK

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=607297 K9N66_RS02120 WP_224434594.1 461708..463387(+) (recN) [Enterococcus mundtii strain P6]
ATGCTACAAGAAATCAGTATCACCAATTTTGCGATTATTCCTGAATTGCGTTTGTCGTTTCATGAAGGAATGACAGCATT
AACAGGAGAAACCGGAGCCGGTAAGTCAATTATTATTGATGCTTTGGGCTTATTAGCAGGTGGTCGCGGATCAAGTGATT
ATATTCGTCAAGGTGCCGATAAATGTATTCTGGAAGGGTTGTTTGAATGGCCTAAACAAGAAGGTTTTGAAGCTTTGATG
GAAGAGTTAGGGATTGAGTCCGATGGTTCAAATCTGATCGTCCGTCGAGATATGTCTTTAGCAGGTAAGAATGTTTGTCG
AGTGAATGGACATATCGTGACATTAGCGAATTTGCGACGCGTAGGTAGTTATTTAGTGGATATCCAAGGTCAAAATGAAC
ATCAGGAACTATTACAACCTGAATCACATCTTGTGTTACTTGATCGTTTTGGAGACTCGACATTCCAACAGAAAAAAAGA
GCGTACCAAGAAGCCTATCAAGCGTATCGTGAACTTGAAAGAAAAGTACGTAAGATCCAACAAAACGAAAAAAACTATGT
CCAACGTATCGATATGTTGAATTTCCAACAAGAAGAAATCGCAGCCGCCCAATTAGAAGTTGGTGAAGAAGAAAAACTTC
GAGAAGAGCGCGATAAATTAAGTAATTATCAAAAAATCGTCGATGGTTTAGCTACTGCTTATGGGGCGCTCAGTGAAGGT
GAACAAAGTAGCCTTGATGGGGTGGGAAGGGCTGTTTCCGAGATCCAAAGTATTGCCCACCTTGATTCAGAGTATGAAGC
AATTTTTGATAATATCCAGAGTGCCTATTATTTATTGCAAGATGCAGTAGGGGACATGAGCAGGCAAATCGATCTGCTTG
AACTGGATGAGAATCGTTTGGAAGAAGTGACGCAACGCATGGAAACGATTCGCCAATTGAAGCGTAAATATGGCGATTCA
GTTGAAGCTATCTTAGCCTACTATGAAGAAATCACAGAAGAATTGGATTCATCTGATTTTACAGAAGGTCAACTTGATAA
AATGAAGAATGAACTGACTCAAAAAGAAGAGTGGGCGTTTCAATGTGCAGAAGAACTCCATCAAGCAAGAAAAGCGATCG
CCAGTGACTTAGAACAGTCGATTCTGCGTGAATTAAAGAGTCTTTATATGGAAAACACCGAATTTGAAGTTCGTTTTTCA
ACGCAAGCAAATGGACGCTTAGATGAGCAAGGTTTTGATATTGTCGAATTTTATATCACGACAAATCCTGGAGAACCATT
GAAGCCACTAGTCAAGGTAGCATCAGGTGGGGAATTGTCACGAGTATTACTTGCTCTGAAAACCATTTTTTCTTCGGAAC
AAGGTGTGACTAGTATCATTTTTGACGAAGTTGATACTGGTGTTAGTGGCAGAGTGGCACAAGCCATTGCGGATAAAATA
TTGAAAATATCCAAATATTCCCAAGTACTTTGTATCACGCATCTTCCTCAAGTGGCGGCGGTAGCGGATTATCAATATTA
CATTGTAAAAGAAGTCGTCGGCGGAAGAACACAAACATCCGTCGCCGAATTAGCTGCAGCTGAAAGAGAAAATGAAATCG
CACGAATGTTAGCGGGAAGTGAAATCACGCCTTTAACGATCGAACACGCCAAAGAGTTGTTACGTTTGGCGAAAAAATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

50.351

100

0.513