Detailed information NTG0607241

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD47_RS22510
• Genome accession: NZ_CP100933
• Coordinates: 4605409..4606434 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET665
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4600409..4611434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD47_RS22490 (NMD47_22340)	metJ	4601470..4601787 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD47_RS22495 (NMD47_22345)	yiiX	4601971..4602579 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD47_RS22500 (NMD47_22350)	rpmE	4602640..4602852 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD47_RS22505 (NMD47_22355)	priA	4603055..4605253 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
NMD47_RS22510 (NMD47_22360)	cytR	4605409..4606434 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD47_RS22515 (NMD47_22365)	ftsN	4606526..4607485 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD47_RS22520 (NMD47_22370)	hslV	4607578..4608108 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD47_RS22525 (NMD47_22375)	hslU	4608118..4609449 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD47_RS22530 (NMD47_22380)	menA	4609516..4610442 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD47_RS22535 (NMD47_22385)	rraA	4610535..4611020 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD47_RS22540 (NMD47_22390)	zapB	4611105..4611350 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=607241 NMD47_RS22510 WP_000644904.1 4605409..4606434(+) (cytR) [Escherichia coli strain ET665]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=607241 NMD47_RS22510 WP_000644904.1 4605409..4606434(+) (cytR) [Escherichia coli strain ET665]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
AGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCAATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628