Detailed information NTG0607077

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD49_RS22900
• Genome accession: NZ_CP100927
• Coordinates: 4634639..4635664 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET729
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4629639..4640664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD49_RS22880 (NMD49_22705)	metJ	4630700..4631017 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD49_RS22885 (NMD49_22710)	yiiX	4631201..4631809 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD49_RS22890 (NMD49_22715)	rpmE	4631870..4632082 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD49_RS22895 (NMD49_22720)	priA	4632285..4634483 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
NMD49_RS22900 (NMD49_22725)	cytR	4634639..4635664 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD49_RS22905 (NMD49_22730)	ftsN	4635756..4636715 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD49_RS22910 (NMD49_22735)	hslV	4636808..4637338 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD49_RS22915 (NMD49_22740)	hslU	4637348..4638679 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD49_RS22920 (NMD49_22745)	menA	4638746..4639672 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD49_RS22925 (NMD49_22750)	rraA	4639765..4640250 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD49_RS22930 (NMD49_22755)	zapB	4640335..4640580 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=607077 NMD49_RS22900 WP_000644904.1 4634639..4635664(+) (cytR) [Escherichia coli strain ET729]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=607077 NMD49_RS22900 WP_000644904.1 4634639..4635664(+) (cytR) [Escherichia coli strain ET729]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628