Detailed information NTG0606914

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD51_RS21840
• Genome accession: NZ_CP100918
• Coordinates: 4524355..4525380 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET745
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4519355..4530380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD51_RS21820 (NMD51_21660)	metJ	4520416..4520733 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD51_RS21825 (NMD51_21665)	yiiX	4520917..4521525 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD51_RS21830 (NMD51_21670)	rpmE	4521586..4521798 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD51_RS21835 (NMD51_21675)	priA	4522001..4524199 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
NMD51_RS21840 (NMD51_21680)	cytR	4524355..4525380 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD51_RS21845 (NMD51_21685)	ftsN	4525472..4526431 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD51_RS21850 (NMD51_21690)	hslV	4526524..4527054 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD51_RS21855 (NMD51_21695)	hslU	4527064..4528395 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD51_RS21860 (NMD51_21700)	menA	4528462..4529388 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD51_RS21865 (NMD51_21705)	rraA	4529481..4529966 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD51_RS21870 (NMD51_21710)	zapB	4530051..4530296 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=606914 NMD51_RS21840 WP_000644904.1 4524355..4525380(+) (cytR) [Escherichia coli strain ET745]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=606914 NMD51_RS21840 WP_000644904.1 4524355..4525380(+) (cytR) [Escherichia coli strain ET745]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTTTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628