Detailed information NTG0606751

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD53_RS21885
• Genome accession: NZ_CP100909
• Coordinates: 4468715..4469740 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET776
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4463715..4474740

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD53_RS21865 (NMD53_21725)	metJ	4464776..4465093 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD53_RS21870 (NMD53_21730)	yiiX	4465277..4465885 (+)	609	WP_063078769.1	YiiX family permuted papain-like enzyme	-
NMD53_RS21875 (NMD53_21735)	rpmE	4465946..4466158 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD53_RS21880 (NMD53_21740)	priA	4466361..4468559 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
NMD53_RS21885 (NMD53_21745)	cytR	4468715..4469740 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD53_RS21890 (NMD53_21750)	ftsN	4469832..4470791 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD53_RS21895 (NMD53_21755)	hslV	4470884..4471414 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD53_RS21900 (NMD53_21760)	hslU	4471424..4472755 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD53_RS21905 (NMD53_21765)	menA	4472822..4473748 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD53_RS21910 (NMD53_21770)	rraA	4473841..4474326 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD53_RS21915 (NMD53_21775)	zapB	4474411..4474656 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=606751 NMD53_RS21885 WP_000644904.1 4468715..4469740(+) (cytR) [Escherichia coli strain ET776]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=606751 NMD53_RS21885 WP_000644904.1 4468715..4469740(+) (cytR) [Escherichia coli strain ET776]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628