Detailed information NTG0606587

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD56_RS22765
• Genome accession: NZ_CP100901
• Coordinates: 4721761..4722786 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET826
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4716761..4727786

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD56_RS22740 (NMD56_22610)	metJ	4717322..4717639 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD56_RS22745 (NMD56_22615)	yiiX	4717699..4718307 (+)	609	WP_001402675.1	YiiX family permuted papain-like enzyme	-
NMD56_RS22750 (NMD56_22620)	-	4718314..4718937 (+)	624	WP_001402674.1	TIGR02117 family protein	-
NMD56_RS22755 (NMD56_22625)	rpmE	4718992..4719204 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD56_RS22760 (NMD56_22630)	priA	4719407..4721605 (+)	2199	WP_001395720.1	primosomal protein N'	Machinery gene
NMD56_RS22765 (NMD56_22635)	cytR	4721761..4722786 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD56_RS22770 (NMD56_22640)	ftsN	4722878..4723837 (+)	960	WP_000068834.1	cell division protein FtsN	-
NMD56_RS22775 (NMD56_22645)	hslV	4723930..4724460 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD56_RS22780 (NMD56_22650)	hslU	4724470..4725801 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
NMD56_RS22785 (NMD56_22655)	menA	4725868..4726794 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD56_RS22790 (NMD56_22660)	rraA	4726887..4727372 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD56_RS22795 (NMD56_22665)	zapB	4727457..4727702 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=606587 NMD56_RS22765 WP_000644904.1 4721761..4722786(+) (cytR) [Escherichia coli strain ET826]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=606587 NMD56_RS22765 WP_000644904.1 4721761..4722786(+) (cytR) [Escherichia coli strain ET826]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628