Detailed information NTG0606419

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NMD58_RS21985
• Genome accession: NZ_CP100890
• Coordinates: 4475417..4476442 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ET881
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4470417..4481442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMD58_RS21965 (NMD58_21815)	metJ	4471478..4471795 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NMD58_RS21970 (NMD58_21820)	yiiX	4471979..4472587 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NMD58_RS21975 (NMD58_21825)	rpmE	4472648..4472860 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NMD58_RS21980 (NMD58_21830)	priA	4473063..4475261 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
NMD58_RS21985 (NMD58_21835)	cytR	4475417..4476442 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NMD58_RS21990 (NMD58_21840)	ftsN	4476534..4477493 (+)	960	WP_000068828.1	cell division protein FtsN	-
NMD58_RS21995 (NMD58_21845)	hslV	4477586..4478116 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NMD58_RS22000 (NMD58_21850)	hslU	4478126..4479457 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NMD58_RS22005 (NMD58_21855)	menA	4479524..4480450 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NMD58_RS22010 (NMD58_21860)	rraA	4480543..4481028 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NMD58_RS22015 (NMD58_21865)	zapB	4481113..4481358 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=606419 NMD58_RS21985 WP_000644904.1 4475417..4476442(+) (cytR) [Escherichia coli strain ET881]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=606419 NMD58_RS21985 WP_000644904.1 4475417..4476442(+) (cytR) [Escherichia coli strain ET881]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628