Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K9838_RS15680 Genome accession   NZ_CP083575
Coordinates   3535600..3536001 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas phaseoli pv. manihotis strain CHN01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3530600..3541001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9838_RS15665 (K9838_15675) - 3532614..3534650 (-) 2037 WP_017155561.1 methyl-accepting chemotaxis protein -
  K9838_RS15670 (K9838_15680) - 3534690..3535220 (-) 531 WP_017158584.1 chemotaxis protein CheW -
  K9838_RS15675 (K9838_15685) - 3535220..3535582 (-) 363 WP_005913708.1 response regulator -
  K9838_RS15680 (K9838_15690) pilG 3535600..3536001 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  K9838_RS15685 (K9838_15695) gshB 3536238..3537188 (+) 951 WP_017155560.1 glutathione synthase -
  K9838_RS15690 (K9838_15700) - 3537185..3538060 (+) 876 WP_017155559.1 energy transducer TonB -
  K9838_RS15695 (K9838_15705) - 3538405..3539322 (-) 918 WP_017155558.1 ADP-ribosylglycohydrolase family protein -
  K9838_RS15700 (K9838_15710) tsaB 3539319..3540038 (-) 720 WP_017155557.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=606257 K9838_RS15680 WP_005913706.1 3535600..3536001(-) (pilG) [Xanthomonas phaseoli pv. manihotis strain CHN01]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=606257 K9838_RS15680 WP_005913706.1 3535600..3536001(-) (pilG) [Xanthomonas phaseoli pv. manihotis strain CHN01]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684