Detailed information NTG0605782

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: K9864_RS07665
• Genome accession: NZ_CP083436
• Coordinates: 1494957..1496093 (-)
• Length: 378 a.a.
• NCBI ID: WP_014417673.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain HC-8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1489957..1501093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9864_RS07625 (K9864_07565)	-	1490493..1490711 (+)	219	WP_014417667.1	helix-turn-helix transcriptional regulator	-
K9864_RS07630 (K9864_07570)	-	1490759..1491040 (+)	282	WP_014417668.1	hypothetical protein	-
K9864_RS07635 (K9864_07575)	-	1491093..1491338 (-)	246	WP_041481754.1	helix-turn-helix domain-containing protein	-
K9864_RS07640 (K9864_07580)	-	1491839..1492555 (+)	717	WP_014721121.1	hypothetical protein	-
K9864_RS07645 (K9864_07585)	-	1492591..1492899 (-)	309	WP_014417670.1	hypothetical protein	-
K9864_RS07650 (K9864_07590)	-	1492912..1494336 (-)	1425	WP_014417671.1	lipase	-
K9864_RS07655 (K9864_07595)	-	1494386..1494751 (+)	366	WP_014417672.1	DUF1433 domain-containing protein	-
K9864_RS07660 (K9864_07600)	-	1494794..1494967 (-)	174	WP_169061491.1	hypothetical protein	-
K9864_RS07665 (K9864_07605)	rapC	1494957..1496093 (-)	1137	WP_014417673.1	RapH N-terminal domain-containing protein	Regulator
K9864_RS07670 (K9864_07610)	-	1496274..1497104 (-)	831	WP_014417674.1	SHOCT domain-containing protein	-
K9864_RS07675 (K9864_07615)	-	1497269..1498159 (-)	891	WP_014417675.1	SH3 domain-containing protein	-
K9864_RS07680 (K9864_07620)	-	1498247..1500865 (-)	2619	WP_014417676.1	phage tail protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44714.10 Da
• Isoelectric Point: 4.8741

>NTDB_id=605782 K9864_RS07665 WP_014417673.1 1494957..1496093(-) (rapC) [Bacillus velezensis strain HC-8]
MKQLISSSKVGVKINEWYKYIRMFSVPDAEVLKSEVEQEINAMEENQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPEIS
DLLEKIESSQAKLKGILEYYFNFFRGMYEFEEYEYLKAISFYKQAEKKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIESYRAHETYSVREIQCSFVIGLNYLDMEYPEKAIPHFQKAYKKALEIDMPRLAGSALYNLGISSFSEEKFDEAI
EYFKEGVLVYEQNGYEHANRLLDILFMLAKTNFKVNKKTEGTAVYNHGLSLAKNLNDEVLTKMFDFLNALYIDDNKEMLN
EILTYLEFKTMFSDVEDLATDAAKYYTKNEDHKAAGLFYEKVLYAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=605782 K9864_RS07665 WP_014417673.1 1494957..1496093(-) (rapC) [Bacillus velezensis strain HC-8]
TTGAAACAGTTAATCTCCTCATCCAAAGTCGGCGTGAAGATTAATGAGTGGTACAAGTATATTCGCATGTTTAGTGTTCC
TGATGCAGAGGTGCTGAAATCAGAAGTGGAACAAGAAATAAACGCTATGGAAGAAAATCAGGATTTATTGTTGTACTATT
CCCTCATGTGTTTTAGACATCAATTAATGCTTGATTATCTTGAACCAAAAACCATGAATGAAGAACGACCTGAGATTTCA
GACTTATTAGAAAAGATCGAAAGTAGCCAAGCTAAATTGAAAGGAATTCTTGAATATTACTTTAACTTTTTCCGTGGGAT
GTATGAATTTGAAGAATACGAATATCTTAAAGCGATAAGTTTTTACAAACAAGCGGAAAAGAAGTTGTCACTTGTAGCCG
ACGAAATTGAGCGAGCGGAGTTTCATTACAAAGTCGCTGAAATTTATTATCACATGAAACAAACACACATGTCGATGCAC
CATATTGTTCAAGCAATCGAAAGCTACAGAGCGCATGAAACCTATTCTGTTAGAGAAATTCAATGTTCTTTTGTTATTGG
TCTAAATTATTTAGATATGGAGTACCCAGAAAAGGCTATCCCTCATTTTCAAAAAGCTTATAAAAAAGCACTTGAAATTG
ATATGCCAAGATTAGCCGGATCCGCTCTATATAATTTAGGGATTTCCTCTTTTTCTGAAGAAAAGTTCGACGAGGCTATT
GAGTATTTCAAAGAAGGAGTGTTGGTCTATGAGCAAAACGGATATGAACATGCTAACCGCTTATTAGACATTCTTTTCAT
GTTAGCGAAAACGAACTTTAAAGTAAATAAGAAAACTGAAGGAACAGCTGTTTATAATCATGGACTGTCATTGGCTAAAA
ACTTAAATGATGAAGTATTAACCAAAATGTTTGATTTCCTAAATGCCCTTTACATTGACGATAACAAAGAAATGCTAAAT
GAGATTCTTACTTATTTAGAATTTAAAACAATGTTTTCCGACGTGGAGGACTTAGCAACCGACGCAGCGAAGTATTATAC
AAAAAATGAAGACCATAAAGCGGCTGGATTATTTTATGAGAAAGTGCTTTATGCCCAAAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (222-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.148	100	0.481
rapF	Bacillus subtilis subsp. subtilis str. 168	45.407	100	0.458