Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   K9864_RS07150 Genome accession   NZ_CP083436
Coordinates   1364162..1364626 (-) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain HC-8     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1359162..1369626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9864_RS07130 (K9864_07070) - 1359643..1361463 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  K9864_RS07135 (K9864_07075) - 1361444..1362657 (-) 1214 Protein_1347 aminotransferase A -
  K9864_RS07140 (K9864_07080) - 1362858..1363019 (-) 162 WP_007409608.1 hypothetical protein -
  K9864_RS07145 (K9864_07085) cheV 1363208..1364119 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  K9864_RS07150 (K9864_07090) kre 1364162..1364626 (-) 465 WP_014417605.1 YkyB family protein Regulator
  K9864_RS07155 (K9864_07095) - 1364749..1366041 (-) 1293 WP_014417606.1 MFS transporter -
  K9864_RS07160 (K9864_07100) - 1366117..1366611 (-) 495 WP_088056573.1 L,D-transpeptidase family protein -
  K9864_RS07165 (K9864_07105) - 1366686..1367549 (-) 864 WP_014417608.1 metallophosphoesterase -
  K9864_RS07170 (K9864_07110) fadH 1367693..1368457 (+) 765 WP_014417609.1 2,4-dienoyl-CoA reductase -
  K9864_RS07175 (K9864_07115) - 1368571..1369119 (+) 549 WP_014417610.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=605779 K9864_RS07150 WP_014417605.1 1364162..1364626(-) (kre) [Bacillus velezensis strain HC-8]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=605779 K9864_RS07150 WP_014417605.1 1364162..1364626(-) (kre) [Bacillus velezensis strain HC-8]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTAACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929