Detailed information NTG0605734

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NLZ09_RS21470
• Genome accession: NZ_CP100525
• Coordinates: 4410536..4411561 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LH13-b
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4405536..4416561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLZ09_RS21450 (NLZ09_21450)	metJ	4406597..4406914 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NLZ09_RS21455 (NLZ09_21455)	yiiX	4407098..4407706 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NLZ09_RS21460 (NLZ09_21460)	rpmE	4407767..4407979 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NLZ09_RS21465 (NLZ09_21465)	priA	4408182..4410380 (+)	2199	WP_254541843.1	primosomal protein N'	Machinery gene
NLZ09_RS21470 (NLZ09_21470)	cytR	4410536..4411561 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NLZ09_RS21475 (NLZ09_21475)	ftsN	4411653..4412612 (+)	960	WP_000068828.1	cell division protein FtsN	-
NLZ09_RS21480 (NLZ09_21480)	hslV	4412705..4413235 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NLZ09_RS21485 (NLZ09_21485)	hslU	4413245..4414576 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NLZ09_RS21490 (NLZ09_21490)	menA	4414643..4415569 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NLZ09_RS21495 (NLZ09_21495)	rraA	4415662..4416147 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NLZ09_RS21500 (NLZ09_21500)	zapB	4416232..4416477 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=605734 NLZ09_RS21470 WP_000644904.1 4410536..4411561(+) (cytR) [Escherichia coli strain LH13-b]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=605734 NLZ09_RS21470 WP_000644904.1 4410536..4411561(+) (cytR) [Escherichia coli strain LH13-b]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628