Detailed information NTG0605653

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NLZ13_RS25730
• Genome accession: NZ_CP100500
• Coordinates: 5294907..5295932 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LH50-c
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5289907..5300932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLZ13_RS25710 (NLZ13_25715)	metJ	5290968..5291285 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NLZ13_RS25715 (NLZ13_25720)	yiiX	5291469..5292077 (+)	609	WP_000877400.1	YiiX family permuted papain-like enzyme	-
NLZ13_RS25720 (NLZ13_25725)	rpmE	5292138..5292350 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NLZ13_RS25725 (NLZ13_25730)	priA	5292553..5294751 (+)	2199	WP_023155166.1	primosomal protein N'	Machinery gene
NLZ13_RS25730 (NLZ13_25735)	cytR	5294907..5295932 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NLZ13_RS25735 (NLZ13_25740)	ftsN	5296024..5296983 (+)	960	WP_112037982.1	cell division protein FtsN	-
NLZ13_RS25740 (NLZ13_25745)	hslV	5297076..5297606 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NLZ13_RS25745 (NLZ13_25750)	hslU	5297616..5298947 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NLZ13_RS25750 (NLZ13_25755)	menA	5299014..5299940 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NLZ13_RS25755 (NLZ13_25760)	rraA	5300033..5300518 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=605653 NLZ13_RS25730 WP_000644904.1 5294907..5295932(+) (cytR) [Escherichia coli strain LH50-c]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=605653 NLZ13_RS25730 WP_000644904.1 5294907..5295932(+) (cytR) [Escherichia coli strain LH50-c]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628