Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K9O83_RS07785 Genome accession   NZ_CP083403
Coordinates   1658336..1658962 (+) Length   208 a.a.
NCBI ID   WP_088204954.1    Uniprot ID   -
Organism   Enterobacter bugandensis strain XL95     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1653336..1663962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9O83_RS07765 (K9O83_07760) - 1653737..1655497 (-) 1761 WP_136486217.1 AAA family ATPase -
  K9O83_RS07770 (K9O83_07765) matP 1655683..1656135 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  K9O83_RS07775 (K9O83_07770) ompA 1656199..1657254 (-) 1056 WP_108780329.1 porin OmpA -
  K9O83_RS07780 (K9O83_07775) sulA 1657609..1658118 (-) 510 WP_041910604.1 SOS-induced cell division inhibitor SulA -
  K9O83_RS07785 (K9O83_07780) sxy/tfoX 1658336..1658962 (+) 627 WP_088204954.1 TfoX/Sxy family DNA transformation protein Regulator
  K9O83_RS07790 (K9O83_07785) yccS 1658919..1661081 (-) 2163 WP_041910602.1 YccS family putative transporter -
  K9O83_RS07795 (K9O83_07790) - 1661101..1661547 (-) 447 WP_041910601.1 YccF domain-containing protein -
  K9O83_RS07800 (K9O83_07795) helD 1661671..1663725 (+) 2055 WP_045261704.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.64 Da        Isoelectric Point: 9.2151

>NTDB_id=605645 K9O83_RS07785 WP_088204954.1 1658336..1658962(+) (sxy/tfoX) [Enterobacter bugandensis strain XL95]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDEGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=605645 K9O83_RS07785 WP_088204954.1 1658336..1658962(+) (sxy/tfoX) [Enterobacter bugandensis strain XL95]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCACTGGGTGAAATTCATCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGTGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCCGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGAGGGGCTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGTTGCTCT
TTGAAGCGGGCATCACCAACGAAGAAACACTGCGGGCGCTTGGCGCAAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCGCTGGAAGGGGCGATCGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.586

95.192

0.558