Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   NLK52_RS18565 Genome accession   NZ_CP100436
Coordinates   3617574..3617948 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain MEC_B298     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3612574..3622948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLK52_RS18540 (NLK52_18540) - 3612739..3612900 (-) 162 WP_003227632.1 hypothetical protein -
  NLK52_RS18545 (NLK52_18545) glpX 3613115..3614080 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  NLK52_RS18550 (NLK52_18550) murAB 3614111..3615400 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  NLK52_RS18555 (NLK52_18555) fsa 3615778..3616416 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  NLK52_RS18560 (NLK52_18560) fbaA 3616536..3617393 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  NLK52_RS18565 (NLK52_18565) letA 3617574..3617948 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  NLK52_RS18570 (NLK52_18570) ywjG 3618114..3618635 (+) 522 WP_015384907.1 DUF2529 domain-containing protein -
  NLK52_RS18575 (NLK52_18575) pyrG 3618717..3620324 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  NLK52_RS18580 (NLK52_18580) rpoE 3620566..3621087 (-) 522 WP_015384908.1 DNA-directed RNA polymerase subunit delta -
  NLK52_RS18585 (NLK52_18585) acdA 3621270..3622409 (-) 1140 WP_015384909.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=605488 NLK52_RS18565 WP_003227621.1 3617574..3617948(-) (letA) [Bacillus subtilis strain MEC_B298]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=605488 NLK52_RS18565 WP_003227621.1 3617574..3617948(-) (letA) [Bacillus subtilis strain MEC_B298]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363