Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LAJ50_RS13705 Genome accession   NZ_CP083376
Coordinates   3067921..3068322 (-) Length   133 a.a.
NCBI ID   WP_130519276.1    Uniprot ID   -
Organism   Pseudoxanthomonas sp. X-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3062921..3073322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAJ50_RS13695 (LAJ50_13685) - 3065199..3067232 (-) 2034 WP_130549728.1 methyl-accepting chemotaxis protein -
  LAJ50_RS13700 (LAJ50_13690) - 3067307..3067837 (-) 531 WP_130550327.1 chemotaxis protein CheW -
  LAJ50_RS13705 (LAJ50_13695) pilG 3067921..3068322 (-) 402 WP_130519276.1 twitching motility response regulator PilG Regulator
  LAJ50_RS13710 (LAJ50_13700) gshB 3068519..3069469 (+) 951 WP_138652522.1 glutathione synthase -
  LAJ50_RS13715 (LAJ50_13705) - 3069478..3070353 (+) 876 WP_138652520.1 energy transducer TonB -
  LAJ50_RS13720 (LAJ50_13710) tsaB 3070548..3071267 (-) 720 WP_138652518.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  LAJ50_RS13725 (LAJ50_13715) sucD 3071680..3072555 (-) 876 WP_130549732.1 succinate--CoA ligase subunit alpha -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14748.96 Da        Isoelectric Point: 5.2337

>NTDB_id=605448 LAJ50_RS13705 WP_130519276.1 3067921..3068322(-) (pilG) [Pseudoxanthomonas sp. X-1]
MTDNDSQAGGLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
NNQVFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLEAIRTHVAA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=605448 LAJ50_RS13705 WP_130519276.1 3067921..3068322(-) (pilG) [Pseudoxanthomonas sp. X-1]
ATGACAGACAACGATAGCCAGGCCGGTGGATTGGACGGCCTGCGGGTGATGGTGATCGACGATTCGAAAACCATCCGGCG
CACGGCCGAGACCCTGCTCAAGCGCGAGGGCTGCGAGGTGGTGACCGCCACCGACGGCTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGACGGCTATCAGACCTGCGCGCTTATCAAG
AACAACCAGGTCTTCAAGAGCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGCTCCGAGCAGTACCTCACCAAACCGTTCACGCGGGAGGAGCTGCTCGAGGCCATCCGCACCCACGTCGCCGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.233

0.692