Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | NLK52_RS03730 | Genome accession | NZ_CP100436 |
| Coordinates | 727552..728682 (+) | Length | 376 a.a. |
| NCBI ID | WP_015482914.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MEC_B298 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 722552..733682
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLK52_RS03710 (NLK52_03710) | yeeF | 722643..724652 (-) | 2010 | WP_015482911.1 | LXG family T7SS effector deoxyribonuclease toxin YeeF | - |
| NLK52_RS03715 (NLK52_03715) | - | 724819..725157 (+) | 339 | WP_015482912.1 | hypothetical protein | - |
| NLK52_RS03720 (NLK52_03720) | - | 725170..726090 (+) | 921 | WP_015383026.1 | DUF5655 domain-containing protein | - |
| NLK52_RS03725 (NLK52_03725) | - | 726246..727406 (+) | 1161 | WP_015482913.1 | lysozyme inhibitor LprI family protein | - |
| NLK52_RS03730 (NLK52_03730) | rapC | 727552..728682 (+) | 1131 | WP_015482914.1 | response regulator aspartate phosphatase RapH | Regulator |
| NLK52_RS03735 (NLK52_03735) | phrH | 728672..728845 (+) | 174 | WP_015482915.1 | phosphatase RapH inhibitor PhrH | - |
| NLK52_RS03740 (NLK52_03740) | yeeI | 729005..729724 (+) | 720 | WP_003242611.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NLK52_RS03745 (NLK52_03745) | yeeK | 729858..730316 (+) | 459 | WP_254410551.1 | spore coat protein YeeK | - |
| NLK52_RS03750 (NLK52_03750) | yezE | 730430..731014 (+) | 585 | WP_015482917.1 | TetR/AcrR family transcriptional regulator | - |
| NLK52_RS03755 (NLK52_03755) | yesE | 731093..731539 (+) | 447 | WP_015383031.1 | nuclear transport factor 2 family protein | - |
| NLK52_RS03760 (NLK52_03760) | yesF | 731536..732401 (+) | 866 | Protein_692 | SDR family oxidoreductase | - |
| NLK52_RS03765 (NLK52_03765) | cotJA | 732528..732776 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| NLK52_RS03770 (NLK52_03770) | cotJB | 732760..733023 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| NLK52_RS03775 (NLK52_03775) | cotJC | 733038..733607 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 43884.14 Da Isoelectric Point: 5.8846
>NTDB_id=605375 NLK52_RS03730 WP_015482914.1 727552..728682(+) (rapC) [Bacillus subtilis strain MEC_B298]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIENPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPVVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HVLQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIENPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPVVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HVLQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=605375 NLK52_RS03730 WP_015482914.1 727552..728682(+) (rapC) [Bacillus subtilis strain MEC_B298]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTACTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGAACCCGCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGGTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATGTTCTTCAAGCCTTGGACATTTATCAAAACAATCCCCTATACAGCATTAGAACCATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTTTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTGTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTACTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGAACCCGCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGGTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATGTTCTTCAAGCCTTGGACATTTATCAAAACAATCCCCTATACAGCATTAGAACCATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTTTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTGTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.16 |
100 |
0.402 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.523 |
100 |
0.396 |