Detailed information NTG0605300

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: NLY78_RS04455
• Genome accession: NZ_CP100435
• Coordinates: 906517..907587 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain DE609B
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 901517..912587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLY78_RS04435 (NLY78_04430)	-	902631..903299 (+)	669	WP_011922395.1	SatD family protein	-
NLY78_RS04440 (NLY78_04435)	-	903303..904043 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
NLY78_RS04445 (NLY78_04440)	-	904108..904545 (+)	438	WP_011922397.1	AAA family ATPase	-
NLY78_RS04450 (NLY78_04445)	-	905256..905917 (+)	662	Protein_829	Abi family protein	-
NLY78_RS04455 (NLY78_04450)	xerS	906517..907587 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
NLY78_RS04460 (NLY78_04455)	-	907657..909165 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
NLY78_RS04465 (NLY78_04460)	-	909241..910182 (-)	942	WP_012775102.1	sensor histidine kinase	-
NLY78_RS04470 (NLY78_04465)	braR	910179..910844 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
NLY78_RS04475 (NLY78_04470)	-	910883..911140 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
NLY78_RS04480 (NLY78_04475)	relB	911124..911375 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=605300 NLY78_RS04455 WP_012775101.1 906517..907587(+) (xerS) [Streptococcus suis strain DE609B]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=605300 NLY78_RS04455 WP_012775101.1 906517..907587(+) (xerS) [Streptococcus suis strain DE609B]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831