Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   K8Z47_RS21950 Genome accession   NZ_CP083269
Coordinates   4247788..4249515 (-) Length   575 a.a.
NCBI ID   WP_014458250.1    Uniprot ID   -
Organism   Priestia aryabhattai strain NM1_A2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4242788..4254515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z47_RS21930 - 4243141..4243293 (+) 153 WP_013059130.1 YycC family protein -
  K8Z47_RS21935 - 4243607..4244938 (+) 1332 WP_098112935.1 peptide MFS transporter -
  K8Z47_RS21940 spo0A 4245309..4246097 (-) 789 WP_013084985.1 sporulation transcription factor Spo0A -
  K8Z47_RS21945 spoIVB 4246325..4247605 (-) 1281 WP_028411587.1 SpoIVB peptidase -
  K8Z47_RS21950 recN 4247788..4249515 (-) 1728 WP_014458250.1 DNA repair protein RecN Machinery gene
  K8Z47_RS21955 ahrC 4249532..4249981 (-) 450 WP_013059136.1 transcriptional regulator AhrC/ArgR -
  K8Z47_RS21960 - 4250143..4250970 (-) 828 WP_223546246.1 TlyA family RNA methyltransferase -
  K8Z47_RS21965 dxs 4250967..4252868 (-) 1902 WP_028411590.1 1-deoxy-D-xylulose-5-phosphate synthase -
  K8Z47_RS21970 - 4253189..4254085 (-) 897 WP_028411591.1 polyprenyl synthetase family protein -
  K8Z47_RS21975 - 4254085..4254318 (-) 234 WP_013059140.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 64625.19 Da        Isoelectric Point: 4.8260

>NTDB_id=605272 K8Z47_RS21950 WP_014458250.1 4247788..4249515(-) (recN) [Priestia aryabhattai strain NM1_A2]
MLAELSIKNFAIIDELSVSFEKGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRHGTDRAEIEGLFLFDEEQHPSHEK
AKQVGLEVEDGMIVLRRDITTNGKSICRINGKLVTLAILREVGQTLIDIHGQHEHQDLMNQDRHLTLLDQYGGEKVEEAL
TEYREVFSRYTSLKKQLDQLTENEQQMAHRLDLIQFQLDEIKAANLQLNEDEELNEERLKISNFEKIYTSLNDAYNALHG
EHQGLDWVGVAMNHTEDISSLEKNYAEISEIISSSFYQLEDASYKIRQQLDLLEFDPKRLDFIEARLNEINHLKRKYGQS
VDEILEYAAQIEDEIDRIENRDTHVSKIKEQLNSVAQDLLVEANNVSAIRKKLAQELTDSIHHELQELYMAKTVFQIKFS
VVNAGKNDVEVNGERIKFTKDGIDNVAFYISTNPGEPLKPLAKVASGGELSRIMLALKSIFSKHQGVTSIIFDEVDTGVS
GRVAQSIGEKIHAISVDSQVLCISHLPQVAAMADTHLFIAKEIKGDRTTTSVLPLTLDEKVKEIGRMIAGAEITSLTKEH
AKELLDLADKMKQTI

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=605272 K8Z47_RS21950 WP_014458250.1 4247788..4249515(-) (recN) [Priestia aryabhattai strain NM1_A2]
TTGTTAGCTGAATTATCCATTAAAAACTTTGCGATTATTGATGAACTTTCTGTTTCATTTGAAAAAGGCTTAACGGTATT
AACAGGCGAAACAGGAGCGGGAAAGTCGATTATTATTGATGCCATTTCATTGTTAGTAGGTGGAAGAGGCTCTTCGGAGT
TTGTCCGCCATGGAACAGACAGAGCCGAAATTGAAGGGCTTTTCTTATTTGATGAAGAACAGCATCCGAGTCACGAAAAA
GCCAAACAAGTCGGTTTGGAAGTGGAAGATGGAATGATTGTGCTTCGCCGAGATATCACTACAAATGGGAAAAGTATTTG
CCGTATCAATGGGAAGCTCGTCACGTTAGCTATCCTACGTGAAGTCGGACAGACGTTAATTGATATACATGGACAGCACG
AGCACCAAGATTTAATGAATCAAGATCGTCACTTAACTCTTCTTGATCAATATGGAGGAGAAAAAGTAGAAGAGGCTTTG
ACGGAGTATCGAGAGGTATTTTCGAGGTATACGTCGCTAAAAAAGCAGTTGGATCAATTAACTGAAAATGAGCAGCAGAT
GGCACATCGCCTCGATCTTATTCAATTTCAATTAGATGAAATCAAAGCCGCAAATTTGCAGCTCAATGAAGACGAGGAAC
TAAATGAAGAGCGTTTGAAGATTTCCAACTTTGAAAAGATCTATACGTCGCTAAACGATGCGTACAATGCGCTGCACGGT
GAACATCAAGGTCTGGATTGGGTAGGCGTAGCAATGAATCATACGGAGGATATTTCGTCACTGGAAAAAAACTATGCCGA
AATTTCGGAGATTATTTCATCGAGCTTCTATCAGTTAGAAGACGCATCTTATAAAATTCGTCAGCAGCTGGATTTATTAG
AATTTGATCCGAAACGCTTAGACTTTATTGAAGCGCGTTTAAATGAAATTAATCACTTAAAGCGTAAATACGGTCAAAGT
GTAGATGAAATTCTAGAATATGCAGCACAAATTGAAGATGAAATTGATCGTATTGAAAATCGAGATACGCACGTGAGCAA
GATCAAAGAACAGTTAAACAGCGTAGCACAGGATTTATTAGTAGAAGCTAACAACGTTTCAGCTATTCGAAAAAAACTTG
CTCAGGAGTTAACGGACAGCATCCATCATGAGCTTCAAGAACTCTATATGGCTAAAACCGTATTTCAAATTAAATTCTCT
GTCGTAAATGCAGGTAAAAATGACGTTGAAGTAAATGGCGAAAGAATAAAATTCACCAAAGACGGCATTGACAACGTAGC
GTTTTATATTTCTACCAACCCTGGTGAACCGTTAAAGCCTCTTGCGAAAGTAGCATCAGGCGGAGAACTGTCAAGGATCA
TGCTGGCGTTAAAGAGCATCTTCTCTAAGCATCAAGGCGTGACGTCCATTATCTTTGATGAAGTTGATACAGGCGTAAGT
GGAAGAGTAGCTCAATCGATCGGTGAAAAAATACATGCCATTTCCGTTGATTCGCAGGTTCTTTGCATATCTCATTTGCC
GCAAGTAGCAGCTATGGCAGATACTCATCTCTTTATTGCTAAAGAGATAAAAGGTGATCGTACAACGACATCTGTTCTTC
CATTAACTCTTGATGAAAAAGTAAAAGAAATTGGTCGAATGATTGCAGGAGCTGAAATTACAAGCTTAACGAAGGAGCAT
GCCAAAGAGCTTTTAGATTTAGCGGATAAGATGAAGCAGACCATTTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

64.931

100

0.65