Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   K8Z47_RS16045 Genome accession   NZ_CP083269
Coordinates   3147041..3147991 (-) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia aryabhattai strain NM1_A2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3142041..3152991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z47_RS16015 - 3142114..3143193 (+) 1080 WP_098112346.1 PrsW family intramembrane metalloprotease -
  K8Z47_RS16020 - 3143662..3143802 (-) 141 WP_014459290.1 hypothetical protein -
  K8Z47_RS16025 - 3144065..3144331 (-) 267 Protein_3099 manganese catalase family protein -
  K8Z47_RS16030 - 3144375..3145325 (-) 951 WP_099000407.1 siderophore ABC transporter substrate-binding protein -
  K8Z47_RS16035 - 3145349..3146107 (-) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  K8Z47_RS16040 - 3146101..3147048 (-) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  K8Z47_RS16045 ceuB 3147041..3147991 (-) 951 WP_028414467.1 ABC transporter permease Machinery gene
  K8Z47_RS16050 - 3148555..3149361 (-) 807 WP_013057892.1 cell wall hydrolase -
  K8Z47_RS16055 - 3149724..3149978 (+) 255 WP_013057893.1 hypothetical protein -
  K8Z47_RS16060 - 3150060..3150224 (-) 165 WP_013057894.1 hypothetical protein -
  K8Z47_RS16065 - 3150715..3150900 (-) 186 WP_014459286.1 hypothetical protein -
  K8Z47_RS16070 - 3151457..3152020 (-) 564 WP_098112347.1 NAD(P)H-dependent oxidoreductase -
  K8Z47_RS16075 lepB 3152256..3152816 (-) 561 WP_098112348.1 signal peptidase I -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=605261 K8Z47_RS16045 WP_028414467.1 3147041..3147991(-) (ceuB) [Priestia aryabhattai strain NM1_A2]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=605261 K8Z47_RS16045 WP_028414467.1 3147041..3147991(-) (ceuB) [Priestia aryabhattai strain NM1_A2]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATTTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGGTTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCCAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497