Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   NLY75_RS01245 Genome accession   NZ_CP100432
Coordinates   220553..222886 (+) Length   777 a.a.
NCBI ID   WP_023369201.1    Uniprot ID   -
Organism   Streptococcus suis T15     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 215553..227886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLY75_RS01225 (NLY75_01225) treP 216206..218200 (-) 1995 WP_023369204.1 PTS system trehalose-specific EIIBC component -
  NLY75_RS01230 (NLY75_01230) treR 218432..219145 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  NLY75_RS01235 (NLY75_01235) - 219203..219514 (+) 312 WP_002935948.1 hypothetical protein -
  NLY75_RS01240 (NLY75_01240) - 219511..220059 (+) 549 WP_023369202.1 CvpA family protein -
  NLY75_RS01245 (NLY75_01245) mutS/mutS2 220553..222886 (+) 2334 WP_023369201.1 endonuclease MutS2 Machinery gene
  NLY75_RS01250 (NLY75_01250) - 223052..223444 (+) 393 WP_014636774.1 DUF1310 family protein -
  NLY75_RS01255 (NLY75_01255) - 223437..223700 (+) 264 WP_022540536.1 hypothetical protein -
  NLY75_RS01260 (NLY75_01260) - 223726..224115 (+) 390 WP_023369199.1 DUF1310 family protein -
  NLY75_RS01265 (NLY75_01265) - 224108..224455 (+) 348 WP_023369196.1 hypothetical protein -
  NLY75_RS01270 (NLY75_01270) - 224503..224880 (+) 378 WP_023369194.1 DUF1310 family protein -
  NLY75_RS01275 (NLY75_01275) - 224888..226117 (+) 1230 WP_023369193.1 Mbeg1-like protein -
  NLY75_RS01280 (NLY75_01280) - 226096..226482 (+) 387 WP_002935925.1 hypothetical protein -
  NLY75_RS01285 (NLY75_01285) - 226495..226815 (+) 321 WP_002935924.1 hypothetical protein -
  NLY75_RS01290 (NLY75_01290) trxA 227057..227371 (+) 315 WP_012775426.1 thioredoxin -
  NLY75_RS11405 - 227464..227514 (-) 51 WP_353735889.1 hypothetical protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87615.32 Da        Isoelectric Point: 6.7042

>NTDB_id=605178 NLY75_RS01245 WP_023369201.1 220553..222886(+) (mutS/mutS2) [Streptococcus suis T15]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVQRIQQAFDELTDIAQIFVENPYFSLSATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVEILRAAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNRARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=605178 NLY75_RS01245 WP_023369201.1 220553..222886(+) (mutS/mutS2) [Streptococcus suis T15]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCAACGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGTCAGCTACTAGTGACATTGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAATTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATTAGAAGAAAAATCCGTGAA
GCTGAAGATCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGTATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCGGGTGTAGTCCATGATATCTCCGCTT
CTGGCTCGACGGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCCTGCAGGAATTATCGGATATGCTCCGTCCGCATAGTGGTGTGATCCGCAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCTAAGCATCTCTTTGCACGTGAACATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTAAGCCTGTACCAAATGACCTTTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACAGGTCCCAACACAGGTGGTAAGACCATCATGCTTAAGACCTTGGGTTTGACCCATCTGAT
GGCTCAGTCTGGTTTGCCTATCTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGGAGATTTTAAGAGCAGCTGAT
CAAGATTCTCTCATTCTATTTGACGAGTTGGGAGCTGGGACCGATCCGCAGGAGGGGGCATCCTTGGCTATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCGACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAACGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAGGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCTAGTCTTAAGCCCCATCAGATTATCGAAGCCAAAGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGCGGGACCTTGACCAATCAGCTCAAGGACGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGGC
CAAGGATGAGTTTGAGTTAGTCAAGGCGGAGAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGTCCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GATCAGGCCCTTCTCAATAACCTAGCCCAAGTCGATATTGTCCACGGTATAGGTACAGGTGTCATCCGAGAAGGGGTGAC
CAAGTACCTACGCCGAAACAAGCAGGTCAAGGAGTTCGGCTATGCCCCACAAAATGCAGGTGGATCAGGCTGTACTATTG
TGACGTTTAAATAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-504)

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.646

100

0.404