Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   K3A98_RS04800 Genome accession   NZ_CP083259
Coordinates   946154..947197 (+) Length   347 a.a.
NCBI ID   WP_001017129.1    Uniprot ID   A0A0U1MRG1
Organism   Staphylococcus aureus strain HL25274     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 941154..952197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3A98_RS04770 (K3A98_000946) - 941721..941830 (+) 110 Protein_939 hypothetical protein -
  K3A98_RS04775 (K3A98_000947) - 941859..942275 (+) 417 WP_025174454.1 hypothetical protein -
  K3A98_RS04780 (K3A98_000948) - 942451..943437 (-) 987 WP_000999711.1 FUSC family protein -
  K3A98_RS04785 (K3A98_000949) map 944080..944838 (+) 759 WP_000636137.1 type I methionyl aminopeptidase -
  K3A98_RS04790 (K3A98_000950) - 945055..945441 (+) 387 WP_001110183.1 hypothetical protein -
  K3A98_RS04795 (K3A98_000951) liaF 945456..946157 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  K3A98_RS04800 (K3A98_000952) vraS 946154..947197 (+) 1044 WP_001017129.1 sensor histidine kinase Regulator
  K3A98_RS04805 (K3A98_000953) vraR 947187..947816 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  K3A98_RS04810 (K3A98_000954) - 947929..949146 (-) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  K3A98_RS04815 (K3A98_000955) - 949424..949699 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  K3A98_RS04820 (K3A98_000956) - 949706..950170 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  K3A98_RS04825 (K3A98_000957) - 950317..950517 (+) 201 WP_001813025.1 DUF1128 family protein -
  K3A98_RS04830 (K3A98_000958) - 950520..951776 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40060.56 Da        Isoelectric Point: 6.0577

>NTDB_id=605143 K3A98_RS04800 WP_001017129.1 946154..947197(+) (vraS) [Staphylococcus aureus strain HL25274]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQILILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=605143 K3A98_RS04800 WP_001017129.1 946154..947197(+) (vraS) [Staphylococcus aureus strain HL25274]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCT
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCGAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U1MRG1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997