Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   K8Z53_RS21510 Genome accession   NZ_CP083238
Coordinates   4058405..4058866 (+) Length   153 a.a.
NCBI ID   WP_003181285.1    Uniprot ID   A0A1Y0YEG4
Organism   Bacillus licheniformis strain 2709     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4053405..4063866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z53_RS21490 (K8Z53_21235) fadH 4054420..4055184 (-) 765 WP_003181295.1 2,4-dienoyl-CoA reductase -
  K8Z53_RS21495 (K8Z53_21240) - 4055330..4056187 (+) 858 WP_003181293.1 metallophosphoesterase -
  K8Z53_RS21500 (K8Z53_21245) - 4056370..4056873 (+) 504 WP_412512633.1 L,D-transpeptidase family protein -
  K8Z53_RS21505 (K8Z53_21250) - 4056962..4058263 (+) 1302 WP_003181287.1 MFS transporter -
  K8Z53_RS21510 (K8Z53_21255) kre 4058405..4058866 (+) 462 WP_003181285.1 YkyB family protein Regulator
  K8Z53_RS21515 (K8Z53_21260) - 4058897..4059814 (-) 918 WP_061576650.1 chemotaxis protein -
  K8Z53_RS21520 (K8Z53_21265) - 4059888..4061207 (-) 1320 WP_044790049.1 MFS transporter -
  K8Z53_RS21525 (K8Z53_21270) - 4061304..4061828 (-) 525 WP_003181280.1 RDD family protein -
  K8Z53_RS21530 (K8Z53_21275) - 4062003..4062158 (+) 156 WP_011197938.1 hypothetical protein -
  K8Z53_RS21535 (K8Z53_21280) - 4062350..4063530 (+) 1181 Protein_4196 aminotransferase A -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17600.40 Da        Isoelectric Point: 10.6730

>NTDB_id=605119 K8Z53_RS21510 WP_003181285.1 4058405..4058866(+) (kre) [Bacillus licheniformis strain 2709]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=605119 K8Z53_RS21510 WP_003181285.1 4058405..4058866(+) (kre) [Bacillus licheniformis strain 2709]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAACCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAAG
GTAAAAAGGTAGGCCTGCATTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATATCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATCAAAGAAAAACCGCTCGTCA
CAAACCGGAAGCGTCCAGCCTCAAAACCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83